Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRDL1Q9BU40 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRDL1Q9BU40 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC005702.3-201ENST00000585345 1447 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 PEX12P1-201ENST00000400284 1048 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 MIR1266-201ENST00000408125 84 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 U3.43-201ENST00000410734 213 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 OR6C71P-201ENST00000432580 913 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AL020997.1-201ENST00000446554 349 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AL022237.1-201ENST00000446663 358 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 NPM1P9-201ENST00000453156 844 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 RPL31P11-202ENST00000454082 372 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 OR9N1P-201ENST00000491296 333 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AL133372.1-201ENST00000493565 745 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC122134.1-201ENST00000565664 1104 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC090651.1-201ENST00000567865 634 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC133552.4-201ENST00000576103 676 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 MIR4675-201ENST00000577898 77 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC004805.3-201ENST00000603178 310 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AC005899.6-201ENST00000620729 297 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AL359976.1-201ENST00000418655 3528 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 AL022322.2-201ENST00000624072 20397 ntBASIC4.98□□□□□ -1.61
CHRDL1Q9BU40 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 LYARP1-201ENST00000436977 1501 ntBASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 AC025470.1-201ENST00000510053 2032 ntBASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 AF287957.1-201ENST00000607368 1595 ntBASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 SNORD35A-201ENST00000363389 86 ntBASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 RAB5CP1-201ENST00000395972 580 ntBASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 RN7SKP281-201ENST00000410472 352 ntBASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRDL1Q9BU40 AC083862.1-201ENST00000427378 1242 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms