Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 MOSPD2-204ENST00000482354 1870 ntTSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 RNU6-1309P-201ENST00000363305 108 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 Y_RNA.259-201ENST00000364619 101 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 RN7SKP204-201ENST00000365481 310 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 RNU6-639P-201ENST00000384074 107 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 RPA3-203ENST00000401447 414 ntTSL 3 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 RNA5SP209-201ENST00000411237 97 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 LYPLA2P3-201ENST00000417429 576 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 FKBP1AP3-201ENST00000423650 319 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 NIPA2P1-201ENST00000426223 976 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC108448.2-201ENST00000431546 730 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 PCBP2P1-201ENST00000437262 977 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 OR13K1P-201ENST00000444577 975 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 PGA5-202ENST00000451616 971 ntTSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 DHFRP3-201ENST00000455595 559 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 RN7SL749P-201ENST00000460421 290 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC110994.1-201ENST00000468519 406 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC006390.1-201ENST00000508068 283 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 HNRNPA1P38-201ENST00000523612 957 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AP001973.1-201ENST00000530177 572 ntTSL 4 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 ZNF705CP-201ENST00000530515 889 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC087241.2-201ENST00000535801 324 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 PDCD5P1-201ENST00000543528 309 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC138512.1-201ENST00000563190 434 ntTSL 3 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 MIR4518-201ENST00000580665 83 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC011442.1-201ENST00000587831 366 ntTSL 5 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC090236.2-201ENST00000587933 1101 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 MIR98-201ENST00000606724 119 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC002059.1-201ENST00000608014 477 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 AP003068.4-201ENST00000623192 802 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AL133320.1-201ENST00000621423 2352 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC096992.2-201ENST00000609553 1684 ntBASIC7.76□□□□□ -1.17
USB1Q9BQ65 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC7.76□□□□□ -1.17
USB1Q9BQ65 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USB1Q9BQ65 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC073349.2-201ENST00000427545 1603 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms