Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC130304.1-201ENST00000622942 2385 ntBASIC8.33□□□□□ -1.08
CCDC7Q96M83 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 RN7SKP77-201ENST00000363261 353 ntBASIC8.33□□□□□ -1.08
CCDC7Q96M83 MYL6P5-201ENST00000412707 459 ntBASIC8.33□□□□□ -1.08
CCDC7Q96M83 HNRNPA1P18-201ENST00000433537 927 ntBASIC8.33□□□□□ -1.08
CCDC7Q96M83 RPS7P3-201ENST00000443360 580 ntBASIC8.33□□□□□ -1.08
CCDC7Q96M83 CUBNP2-201ENST00000443534 1139 ntBASIC8.33□□□□□ -1.08
CCDC7Q96M83 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 AC110056.1-201ENST00000525759 911 ntBASIC8.33□□□□□ -1.08
CCDC7Q96M83 AC079600.1-201ENST00000550326 297 ntBASIC8.33□□□□□ -1.08
CCDC7Q96M83 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 MIR6793-201ENST00000612376 63 ntBASIC8.33□□□□□ -1.08
CCDC7Q96M83 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.33□□□□□ -1.08
CCDC7Q96M83 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC7Q96M83 AL161756.3-201ENST00000641216 2071 ntBASIC8.32□□□□□ -1.08
CCDC7Q96M83 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC7Q96M83 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC7Q96M83 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC7Q96M83 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC7Q96M83 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC7Q96M83 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC7Q96M83 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC7Q96M83 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC7Q96M83 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 MIR1203-201ENST00000408812 85 ntBASIC8.32□□□□□ -1.08
CCDC7Q96M83 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 NDUFS5P5-201ENST00000437256 321 ntBASIC8.32□□□□□ -1.08
CCDC7Q96M83 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 ACA64.4-201ENST00000459070 127 ntBASIC8.32□□□□□ -1.08
CCDC7Q96M83 TRBV5-2-201ENST00000489095 273 ntBASIC8.32□□□□□ -1.08
CCDC7Q96M83 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 OR56A7P-201ENST00000524865 941 ntBASIC8.32□□□□□ -1.08
CCDC7Q96M83 AC018558.5-201ENST00000565840 952 ntBASIC8.32□□□□□ -1.08
CCDC7Q96M83 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC7Q96M83 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CCDC7Q96M83 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 RPS14P4-201ENST00000415880 418 ntBASIC8.31□□□□□ -1.08
CCDC7Q96M83 KRTAP8-2P-201ENST00000440620 186 ntBASIC8.31□□□□□ -1.08
CCDC7Q96M83 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 GEMIN2P1-201ENST00000454246 752 ntBASIC8.31□□□□□ -1.08
CCDC7Q96M83 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 RPS27AP2-201ENST00000457576 465 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms