Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AC134879.1-201ENST00000426062 394 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AC010975.2-201ENST00000427781 588 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 RPL35P8-201ENST00000433284 337 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 ST13P21-201ENST00000453250 1098 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AC019084.1-201ENST00000457337 432 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 RPS6P4-201ENST00000494693 758 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 PFN2-213ENST00000494827 793 ntTSL 4 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 MAST4-IT1-201ENST00000514241 658 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 RNU6-327P-201ENST00000516270 127 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 OR9G2P-201ENST00000533326 880 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AC138749.2-201ENST00000566048 167 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 CLPTM1LP1-201ENST00000604519 484 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AL391903.2-201ENST00000614532 247 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AL451054.1-201ENST00000621770 772 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AP003400.2-201ENST00000624036 666 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM47Q96LD4 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM47Q96LD4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.65□□□□□ -1.03
TRIM47Q96LD4 MAPK10-377ENST00000642006 2752 ntBASIC8.65□□□□□ -1.03
TRIM47Q96LD4 SALL1P1-201ENST00000438101 3837 ntBASIC8.65□□□□□ -1.03
TRIM47Q96LD4 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM47Q96LD4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM47Q96LD4 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM47Q96LD4 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM47Q96LD4 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 THAP12P7-201ENST00000520248 2290 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 Y_RNA.326-201ENST00000365176 113 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 SSX9-201ENST00000376909 591 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC009310.1-201ENST00000414414 451 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 BX119904.1-201ENST00000432026 348 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC022080.2-201ENST00000452932 533 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 RPS6P2-201ENST00000454208 705 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AL121769.1-201ENST00000469473 401 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 RN7SL655P-201ENST00000486087 298 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC079594.1-201ENST00000489757 331 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 GAPDHP71-201ENST00000511530 1003 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC093677.1-201ENST00000514414 678 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AP004833.3-201ENST00000531893 322 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AP002004.1-206ENST00000532441 876 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 RN7SL66P-201ENST00000582099 264 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AL360085.1-201ENST00000604713 532 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC040896.1-201ENST00000613819 479 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AL355480.1-201ENST00000629041 99 ntBASIC8.64□□□□□ -1.03
TRIM47Q96LD4 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms