Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.22□□□□□ -1.25
ERCC4Q92889 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 AC005225.5-201ENST00000623547 2225 ntBASIC7.21□□□□□ -1.25
ERCC4Q92889 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.21□□□□□ -1.25
ERCC4Q92889 DDX6P1-205ENST00000441966 1436 ntBASIC7.21□□□□□ -1.25
ERCC4Q92889 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC4Q92889 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
ERCC4Q92889 RNA5SP382-201ENST00000363355 112 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 SNORD35A-201ENST00000363389 86 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 RN7SKP186-201ENST00000365371 303 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC4Q92889 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AHCYP8-201ENST00000425108 209 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 AL596268.1-201ENST00000427910 1048 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 E2F6P1-201ENST00000428850 745 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 HMGB3P5-201ENST00000428894 612 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 MED28P4-201ENST00000433137 572 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 E2F6P3-201ENST00000441743 743 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 DNAJC19P5-201ENST00000443295 316 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AC009244.1-201ENST00000450566 258 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 CCNJP1-201ENST00000450600 1149 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.21□□□□□ -1.26
ERCC4Q92889 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC4Q92889 RPL23AP73-201ENST00000492507 471 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AC108157.1-201ENST00000510511 539 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.21□□□□□ -1.26
ERCC4Q92889 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.21□□□□□ -1.26
ERCC4Q92889 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AC084759.1-201ENST00000561168 290 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC7.21□□□□□ -1.26
ERCC4Q92889 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC4Q92889 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AC125494.2-201ENST00000602431 657 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 AC097065.2-201ENST00000608159 533 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 AL008723.3-201ENST00000608926 449 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 AC093635.1-201ENST00000609028 555 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 AL031658.2-201ENST00000616850 651 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 AC068880.4-201ENST00000623082 495 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 AC005514.1-201ENST00000623521 208 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC4Q92889 AC099654.8-201ENST00000637757 681 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 AC120036.2-201ENST00000509729 1474 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC4Q92889 IMMTP1-201ENST00000435590 2219 ntBASIC7.21□□□□□ -1.26
ERCC4Q92889 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC4Q92889 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC4Q92889 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC4Q92889 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC4Q92889 AC119674.1-213ENST00000641177 1386 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC4Q92889 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
ERCC4Q92889 GUCY1B2-204ENST00000531898 1979 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ERCC4Q92889 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ERCC4Q92889 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC4Q92889 BMS1P13-201ENST00000417301 885 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 CYP4F30P-202ENST00000420048 405 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ERCC4Q92889 RPL7AP14-201ENST00000424041 802 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC4Q92889 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC4Q92889 BMS1P11-201ENST00000442351 885 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 BMS1P9-201ENST00000457640 885 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC4Q92889 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC4Q92889 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC4Q92889 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC4Q92889 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 OR4A40P-201ENST00000533878 948 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ERCC4Q92889 AL049838.1-201ENST00000563647 981 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC4Q92889 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC4Q92889 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC4Q92889 DIMT1P1-201ENST00000603970 763 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 AL591222.2-201ENST00000604443 754 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC4Q92889 AC024589.2-201ENST00000605642 1294 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 AC097641.3-201ENST00000613523 464 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 AC073342.3-201ENST00000624211 193 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC4Q92889 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms