Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 SNX18P12-201ENST00000624821 759 ntBASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 AC024587.1-201ENST00000505925 2157 ntBASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71LQ8N9Z2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 RPL12P23-201ENST00000405880 490 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 RNU2-22P-201ENST00000411266 212 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 E2F6P1-201ENST00000428850 745 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 E2F6P3-201ENST00000441743 743 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 RPS3AP49-201ENST00000472161 790 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 RN7SL836P-201ENST00000476140 296 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 RN7SL413P-201ENST00000482700 297 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 RN7SL475P-201ENST00000583379 298 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AL049829.3-202ENST00000604278 711 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AL133481.2-203ENST00000607558 139 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 OR51C1P-201ENST00000608504 942 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 OFD1P15Y-201ENST00000411536 1392 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 AL022322.2-201ENST00000624072 20397 ntBASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CCDC71LQ8N9Z2 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 QRSL1P3-201ENST00000552666 1316 ntBASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 AL353796.1-201ENST00000561542 3241 ntBASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 AC010894.1-201ENST00000313760 361 ntBASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 MIR133A2-201ENST00000347538 102 ntBASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 RNA5SP375-201ENST00000362975 119 ntBASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 AL354766.1-201ENST00000423396 542 ntBASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC71LQ8N9Z2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms