Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.14□□□□□ -1.43
CDKL3Q8IVW4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 GNL2P1-201ENST00000451274 2190 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 YWHAZP6-201ENST00000399764 738 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC021876.1-201ENST00000425959 359 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 SUMO2P8-201ENST00000434672 286 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 DNAJC19P5-201ENST00000443295 316 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC010240.2-201ENST00000445363 1205 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 PPIAP7-201ENST00000454070 489 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AL603882.1-201ENST00000463059 681 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 PFN1P6-201ENST00000476786 399 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC093719.1-201ENST00000480427 441 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 OR7E158P-201ENST00000524483 910 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AP000620.1-201ENST00000527147 504 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC007346.1-201ENST00000569208 867 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC073333.2-201ENST00000603589 769 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 uc_338.29-201ENST00000615099 168 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC073488.6-201ENST00000632293 754 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 RBMY1HP-201ENST00000382759 1389 ntBASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDKL3Q8IVW4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 SNRPEP6-201ENST00000407465 277 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AC096632.2-201ENST00000438139 1239 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AC116917.1-201ENST00000520558 305 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AC110056.1-201ENST00000525759 911 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AC090424.1-201ENST00000535243 736 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 TTC41P-205ENST00000551270 3963 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 MIR4433B-201ENST00000581329 102 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AC006115.2-201ENST00000596823 202 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 RPL12P48-201ENST00000605620 304 ntBASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDKL3Q8IVW4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.11□□□□□ -1.43
CDKL3Q8IVW4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms