Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
YBX1P67809 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
YBX1P67809 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
YBX1P67809 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 RNU6-1017P-201ENST00000363613 106 ntBASIC6.72□□□□□ -1.33
YBX1P67809 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.72□□□□□ -1.33
YBX1P67809 SNORA70G-201ENST00000383923 142 ntBASIC6.72□□□□□ -1.33
YBX1P67809 RNU6-517P-201ENST00000384362 110 ntBASIC6.72□□□□□ -1.33
YBX1P67809 SNORD116-12-201ENST00000384468 92 ntBASIC6.72□□□□□ -1.33
YBX1P67809 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 SETP15-201ENST00000412724 337 ntBASIC6.72□□□□□ -1.33
YBX1P67809 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.72□□□□□ -1.33
YBX1P67809 MTND4P20-201ENST00000424125 869 ntBASIC6.72□□□□□ -1.33
YBX1P67809 DEFB130D-201ENST00000426866 237 ntBASIC6.72□□□□□ -1.33
YBX1P67809 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.72□□□□□ -1.33
YBX1P67809 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 MTCO1P43-201ENST00000431831 488 ntBASIC6.72□□□□□ -1.33
YBX1P67809 GTF2IP3-201ENST00000433887 494 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AC098826.1-201ENST00000433943 471 ntBASIC6.72□□□□□ -1.33
YBX1P67809 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
YBX1P67809 PCNPP2-201ENST00000441651 455 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AL589880.1-201ENST00000448271 287 ntBASIC6.72□□□□□ -1.33
YBX1P67809 RPL7P45-201ENST00000455851 743 ntBASIC6.72□□□□□ -1.33
YBX1P67809 NDUFA12P1-201ENST00000455914 406 ntBASIC6.72□□□□□ -1.33
YBX1P67809 EIF3LP2-201ENST00000457262 807 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AC005410.1-202ENST00000460347 485 ntBASIC6.72□□□□□ -1.33
YBX1P67809 SRRM1P2-201ENST00000464531 1192 ntBASIC6.72□□□□□ -1.33
YBX1P67809 RN7SL379P-201ENST00000479912 293 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AC104685.1-201ENST00000502445 371 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.72□□□□□ -1.33
YBX1P67809 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.72□□□□□ -1.33
YBX1P67809 AC093325.1-201ENST00000508378 326 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.72□□□□□ -1.33
YBX1P67809 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.72□□□□□ -1.33
YBX1P67809 IGLVV-66-201ENST00000523818 341 ntBASIC6.72□□□□□ -1.33
YBX1P67809 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 AC006518.2-201ENST00000542513 940 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.72□□□□□ -1.33
YBX1P67809 AC069240.2-201ENST00000550242 609 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AC025918.2-201ENST00000558683 763 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.72□□□□□ -1.33
YBX1P67809 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 AC023827.2-201ENST00000566880 1061 ntBASIC6.72□□□□□ -1.33
YBX1P67809 FCGR1CP-201ENST00000579737 1127 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 DPRXP5-201ENST00000604662 539 ntBASIC6.72□□□□□ -1.33
YBX1P67809 HMGB1P51-201ENST00000605166 638 ntBASIC6.72□□□□□ -1.33
YBX1P67809 MIR8082-201ENST00000612488 81 ntBASIC6.72□□□□□ -1.33
YBX1P67809 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AC022079.2-201ENST00000619739 566 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AL035661.1-201ENST00000620459 1144 ntBASIC6.72□□□□□ -1.33
YBX1P67809 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 AC015804.1-201ENST00000622935 435 ntBASIC6.72□□□□□ -1.33
YBX1P67809 AC093648.1-201ENST00000623546 606 ntBASIC6.72□□□□□ -1.33
YBX1P67809 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 AC243725.1-201ENST00000637164 436 ntBASIC6.72□□□□□ -1.33
YBX1P67809 MIR1322-201ENST00000638013 71 ntBASIC6.72□□□□□ -1.33
YBX1P67809 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
YBX1P67809 AP002833.3-201ENST00000625075 2265 ntBASIC6.72□□□□□ -1.33
YBX1P67809 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 AP000866.6-201ENST00000638898 3579 ntBASIC6.72□□□□□ -1.33
YBX1P67809 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.72□□□□□ -1.33
YBX1P67809 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
YBX1P67809 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.72□□□□□ -1.33
YBX1P67809 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 AC123769.2-201ENST00000624332 5984 ntBASIC6.72□□□□□ -1.33
YBX1P67809 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.72□□□□□ -1.33
YBX1P67809 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
YBX1P67809 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
YBX1P67809 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.72□□□□□ -1.33
YBX1P67809 AC126474.2-201ENST00000623268 1750 ntBASIC6.72□□□□□ -1.33
YBX1P67809 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
YBX1P67809 CCDC162P-202ENST00000368966 6751 ntBASIC6.71□□□□□ -1.33
YBX1P67809 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.71□□□□□ -1.33
YBX1P67809 AC022507.1-201ENST00000548349 1505 ntBASIC6.71□□□□□ -1.33
YBX1P67809 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.71□□□□□ -1.33
YBX1P67809 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.71□□□□□ -1.33
YBX1P67809 TRIM53CP-201ENST00000531490 1354 ntBASIC6.71□□□□□ -1.33
YBX1P67809 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.71□□□□□ -1.33
YBX1P67809 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
YBX1P67809 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.71□□□□□ -1.33
YBX1P67809 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
YBX1P67809 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.71□□□□□ -1.33
YBX1P67809 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
YBX1P67809 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms