Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.31□□□□□ -1.56
VBP1P61758 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.31□□□□□ -1.56
VBP1P61758 OR52I1-201ENST00000450052 1050 ntBASIC5.31□□□□□ -1.56
VBP1P61758 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC5.31□□□□□ -1.56
VBP1P61758 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.31□□□□□ -1.56
VBP1P61758 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.31□□□□□ -1.56
VBP1P61758 AC023424.1-201ENST00000496058 459 ntBASIC5.31□□□□□ -1.56
VBP1P61758 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.31□□□□□ -1.56
VBP1P61758 RNU6-513P-201ENST00000516104 104 ntBASIC5.31□□□□□ -1.56
VBP1P61758 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.31□□□□□ -1.56
VBP1P61758 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.31□□□□□ -1.56
VBP1P61758 OR4C1P-201ENST00000530880 937 ntBASIC5.31□□□□□ -1.56
VBP1P61758 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.31□□□□□ -1.56
VBP1P61758 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.31□□□□□ -1.56
VBP1P61758 AC023968.1-201ENST00000560719 475 ntBASIC5.31□□□□□ -1.56
VBP1P61758 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.31□□□□□ -1.56
VBP1P61758 AL163952.1-202ENST00000569625 600 ntBASIC5.31□□□□□ -1.56
VBP1P61758 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.31□□□□□ -1.56
VBP1P61758 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.31□□□□□ -1.56
VBP1P61758 MIR3689C-201ENST00000581239 72 ntBASIC5.31□□□□□ -1.56
VBP1P61758 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.31□□□□□ -1.56
VBP1P61758 COX6CP7-201ENST00000597056 208 ntBASIC5.31□□□□□ -1.56
VBP1P61758 RAB28P4-201ENST00000622233 665 ntBASIC5.31□□□□□ -1.56
VBP1P61758 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.31□□□□□ -1.56
VBP1P61758 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.31□□□□□ -1.56
VBP1P61758 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.31□□□□□ -1.56
VBP1P61758 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 AC007938.2-201ENST00000604666 2634 ntBASIC5.31□□□□□ -1.56
VBP1P61758 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.31□□□□□ -1.56
VBP1P61758 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.31□□□□□ -1.56
VBP1P61758 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.31□□□□□ -1.56
VBP1P61758 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.3□□□□□ -1.56
VBP1P61758 AC083899.1-201ENST00000454465 3819 ntBASIC5.3□□□□□ -1.56
VBP1P61758 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.3□□□□□ -1.56
VBP1P61758 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.3□□□□□ -1.56
VBP1P61758 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 AC233289.1-201ENST00000403700 508 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AL079341.1-201ENST00000404701 1207 ntBASIC5.3□□□□□ -1.56
VBP1P61758 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 RANP7-201ENST00000418085 644 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 RPS10P18-201ENST00000442662 495 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 AL589765.3-201ENST00000446084 462 ntBASIC5.3□□□□□ -1.56
VBP1P61758 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.3□□□□□ -1.56
VBP1P61758 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 ABCC13-202ENST00000463099 3842 ntBASIC5.3□□□□□ -1.56
VBP1P61758 RN7SL836P-201ENST00000476140 296 ntBASIC5.3□□□□□ -1.56
VBP1P61758 RPL34P29-201ENST00000491411 325 ntBASIC5.3□□□□□ -1.56
VBP1P61758 SNX18P24-201ENST00000505249 671 ntBASIC5.3□□□□□ -1.56
VBP1P61758 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 RNA5SP230-201ENST00000517039 122 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 IGHV4-55-201ENST00000520889 368 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AP003041.2-201ENST00000525666 1180 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AL133399.1-201ENST00000527476 298 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AP001858.2-201ENST00000536213 601 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.3□□□□□ -1.56
VBP1P61758 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.3□□□□□ -1.56
VBP1P61758 RN7SL820P-201ENST00000616437 299 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AC006840.1-201ENST00000623069 542 ntBASIC5.3□□□□□ -1.56
VBP1P61758 AC127071.2-201ENST00000623293 527 ntBASIC5.3□□□□□ -1.56
VBP1P61758 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 AC104964.3-201ENST00000606115 2860 ntBASIC5.3□□□□□ -1.56
VBP1P61758 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VBP1P61758 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.3□□□□□ -1.56
VBP1P61758 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VBP1P61758 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 AC004817.4-201ENST00000602396 3625 ntBASIC5.3□□□□□ -1.56
VBP1P61758 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VBP1P61758 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.3□□□□□ -1.56
VBP1P61758 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.3□□□□□ -1.56
VBP1P61758 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VBP1P61758 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VBP1P61758 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VBP1P61758 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.29□□□□□ -1.56
VBP1P61758 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms