Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN8P56748 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN8P56748 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN8P56748 AP002512.4-202ENST00000641599 4530 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLDN8P56748 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN8P56748 RNA5SP198-201ENST00000410376 127 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.69□□□□□ -1.5
CLDN8P56748 VN1R20P-201ENST00000425215 966 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN8P56748 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 AC010086.1-201ENST00000437359 1052 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 AC097359.1-201ENST00000447946 463 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 RNU7-157P-201ENST00000459600 66 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 AL603882.1-201ENST00000463059 681 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 H3F3AP5-201ENST00000475267 429 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 RPL12P30-201ENST00000488389 499 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 PDCL3P4-201ENST00000489621 720 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.69□□□□□ -1.5
CLDN8P56748 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CLDN8P56748 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 ZNF519P4-201ENST00000514008 125 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 RN7SL66P-201ENST00000582099 264 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 AC060780.2-201ENST00000589047 198 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN8P56748 LSM1P2-201ENST00000604911 322 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 AL080312.2-201ENST00000613001 630 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 AL357562.1-201ENST00000624911 609 ntBASIC5.69□□□□□ -1.5
CLDN8P56748 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLDN8P56748 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN8P56748 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLDN8P56748 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLDN8P56748 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN8P56748 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN8P56748 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN8P56748 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLDN8P56748 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN8P56748 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN8P56748 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLDN8P56748 AL158152.1-201ENST00000602652 1435 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN8P56748 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CLDN8P56748 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN8P56748 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN8P56748 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN8P56748 MTHFD2P5-201ENST00000320415 844 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLDN8P56748 U3.10-201ENST00000364459 214 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN8P56748 RN7SKP108-201ENST00000411367 328 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN8P56748 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN8P56748 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN8P56748 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN8P56748 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN8P56748 PA2G4P1-201ENST00000442248 1197 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 TRIM60P16-201ENST00000444048 694 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN8P56748 FRG2FP-204ENST00000453982 852 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 AC104164.1-201ENST00000460282 590 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 RPS7P10-201ENST00000464254 603 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN8P56748 PFN1P6-201ENST00000476786 399 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN8P56748 HMGN1P16-201ENST00000508308 283 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 CR383658.1-201ENST00000514609 734 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 OR4A42P-201ENST00000531397 938 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN8P56748 AC090424.1-201ENST00000535243 736 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 AL121594.2-201ENST00000541658 472 ntBASIC5.68□□□□□ -1.5
CLDN8P56748 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN8P56748 AC090826.1-203ENST00000569235 490 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 454.7 ms