Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
PKNOX1P55347 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 RN7SKP186-201ENST00000365371 303 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 AC092601.1-201ENST00000444526 383 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 AC016027.4-201ENST00000450866 277 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.83□□□□□ -1.48
PKNOX1P55347 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 SNX18P25-201ENST00000510539 758 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.83□□□□□ -1.48
PKNOX1P55347 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.83□□□□□ -1.48
PKNOX1P55347 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.83□□□□□ -1.48
PKNOX1P55347 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.83□□□□□ -1.48
PKNOX1P55347 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.83□□□□□ -1.48
PKNOX1P55347 HMGN2P47-201ENST00000559378 272 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 AL163952.1-202ENST00000569625 600 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.83□□□□□ -1.48
PKNOX1P55347 AP005136.2-201ENST00000583253 1049 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 AC069542.2-201ENST00000624816 216 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.83□□□□□ -1.48
PKNOX1P55347 AC232271.1-201ENST00000602455 2715 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
PKNOX1P55347 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PKNOX1P55347 AC018717.1-201ENST00000457712 1505 ntBASIC5.83□□□□□ -1.48
PKNOX1P55347 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PKNOX1P55347 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKNOX1P55347 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.82□□□□□ -1.48
PKNOX1P55347 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PKNOX1P55347 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.82□□□□□ -1.48
PKNOX1P55347 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 RNA5SP211-201ENST00000365516 117 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.82□□□□□ -1.48
PKNOX1P55347 NMD3P2-201ENST00000421815 761 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 OR5W1P-201ENST00000423705 938 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 RPL7AP14-201ENST00000424041 802 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.82□□□□□ -1.48
PKNOX1P55347 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.82□□□□□ -1.48
PKNOX1P55347 PSMD10P2-201ENST00000432890 672 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 SEPT14P12-201ENST00000442280 560 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 RPSAP40-201ENST00000442343 891 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.82□□□□□ -1.48
PKNOX1P55347 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.82□□□□□ -1.48
PKNOX1P55347 AC002553.3-201ENST00000453002 341 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 RARRES2P3-201ENST00000457739 473 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 AC079080.1-201ENST00000479841 822 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.82□□□□□ -1.48
PKNOX1P55347 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.82□□□□□ -1.48
PKNOX1P55347 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.82□□□□□ -1.48
PKNOX1P55347 BMS1P16-201ENST00000556075 1147 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 RN7SL66P-201ENST00000582099 264 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.82□□□□□ -1.48
PKNOX1P55347 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
PKNOX1P55347 AC012368.3-201ENST00000604190 219 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 RPSAP75-201ENST00000605848 301 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.82□□□□□ -1.48
PKNOX1P55347 AL645933.2-201ENST00000606743 1207 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 AC097641.3-201ENST00000613523 464 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.82□□□□□ -1.48
PKNOX1P55347 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.82□□□□□ -1.48
PKNOX1P55347 AC010325.3-201ENST00000641084 394 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PKNOX1P55347 GTF2IP4-201ENST00000453092 2054 ntBASIC5.82□□□□□ -1.48
PKNOX1P55347 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PKNOX1P55347 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.82□□□□□ -1.48
PKNOX1P55347 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKNOX1P55347 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PKNOX1P55347 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.82□□□□□ -1.48
PKNOX1P55347 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PKNOX1P55347 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.81□□□□□ -1.48
PKNOX1P55347 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 SNORA21-201ENST00000362423 132 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 RNA5SP453-201ENST00000362503 119 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.81□□□□□ -1.48
PKNOX1P55347 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.81□□□□□ -1.48
PKNOX1P55347 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKNOX1P55347 PA2G4P1-201ENST00000442248 1197 ntBASIC5.81□□□□□ -1.48
PKNOX1P55347 TRIM60P16-201ENST00000444048 694 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms