Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH13P55290 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDH13P55290 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH13P55290 AC027575.3-201ENST00000583058 2747 ntBASIC5.94□□□□□ -1.46
CDH13P55290 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH13P55290 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 SNORA64.3-201ENST00000365647 134 ntBASIC5.93□□□□□ -1.46
CDH13P55290 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 AC017078.1-201ENST00000416146 368 ntBASIC5.93□□□□□ -1.46
CDH13P55290 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 NME1P1-201ENST00000420914 382 ntBASIC5.93□□□□□ -1.46
CDH13P55290 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 RPS3AP38-201ENST00000435889 763 ntBASIC5.93□□□□□ -1.46
CDH13P55290 RPEP4-201ENST00000437636 602 ntBASIC5.93□□□□□ -1.46
CDH13P55290 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 AL512593.1-201ENST00000444758 779 ntBASIC5.93□□□□□ -1.46
CDH13P55290 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 RPS26P24-201ENST00000497656 331 ntBASIC5.93□□□□□ -1.46
CDH13P55290 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH13P55290 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.93□□□□□ -1.46
CDH13P55290 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH13P55290 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 AC078878.1-201ENST00000539832 958 ntBASIC5.93□□□□□ -1.46
CDH13P55290 AC093388.1-201ENST00000609166 430 ntBASIC5.93□□□□□ -1.46
CDH13P55290 AC117490.2-201ENST00000610042 594 ntBASIC5.93□□□□□ -1.46
CDH13P55290 AF117829.2-201ENST00000619538 361 ntBASIC5.93□□□□□ -1.46
CDH13P55290 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 AC119674.1-202ENST00000641333 1860 ntBASIC5.93□□□□□ -1.46
CDH13P55290 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH13P55290 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH13P55290 AC016583.1-201ENST00000624221 2431 ntBASIC5.93□□□□□ -1.46
CDH13P55290 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH13P55290 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH13P55290 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH13P55290 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
CDH13P55290 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH13P55290 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH13P55290 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH13P55290 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
CDH13P55290 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH13P55290 RNU6-891P-201ENST00000384280 111 ntBASIC5.92□□□□□ -1.46
CDH13P55290 RNU11-201ENST00000387069 134 ntBASIC5.92□□□□□ -1.46
CDH13P55290 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDH13P55290 NPM1P10-201ENST00000398310 865 ntBASIC5.92□□□□□ -1.46
CDH13P55290 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.92□□□□□ -1.46
CDH13P55290 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH13P55290 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH13P55290 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.92□□□□□ -1.46
CDH13P55290 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH13P55290 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.92□□□□□ -1.46
CDH13P55290 USP24P1-201ENST00000433802 779 ntBASIC5.92□□□□□ -1.46
CDH13P55290 AC013403.1-201ENST00000436954 263 ntBASIC5.92□□□□□ -1.46
CDH13P55290 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH13P55290 AC234771.2-201ENST00000445718 597 ntBASIC5.92□□□□□ -1.46
CDH13P55290 AL356390.1-201ENST00000455684 397 ntBASIC5.92□□□□□ -1.46
CDH13P55290 RPS4XP17-201ENST00000479057 754 ntBASIC5.92□□□□□ -1.46
CDH13P55290 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH13P55290 AC098799.1-201ENST00000504752 800 ntBASIC5.92□□□□□ -1.46
CDH13P55290 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH13P55290 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms