Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.21□□□□□ -1.41
CDH6P55285 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.21□□□□□ -1.41
CDH6P55285 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
CDH6P55285 AC090220.1-201ENST00000593078 1699 ntBASIC6.21□□□□□ -1.42
CDH6P55285 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH6P55285 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH6P55285 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH6P55285 GCNT1P4-201ENST00000404096 329 ntBASIC6.21□□□□□ -1.42
CDH6P55285 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH6P55285 AC245096.1-201ENST00000413104 546 ntBASIC6.21□□□□□ -1.42
CDH6P55285 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH6P55285 AC092651.1-201ENST00000426110 312 ntBASIC6.21□□□□□ -1.42
CDH6P55285 AL354893.1-201ENST00000433735 348 ntBASIC6.21□□□□□ -1.42
CDH6P55285 AL353662.1-201ENST00000439099 327 ntBASIC6.21□□□□□ -1.42
CDH6P55285 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH6P55285 AC097463.1-201ENST00000447288 481 ntBASIC6.21□□□□□ -1.42
CDH6P55285 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH6P55285 AC118758.1-202ENST00000454719 225 ntBASIC6.21□□□□□ -1.42
CDH6P55285 AC021006.1-201ENST00000489849 553 ntBASIC6.21□□□□□ -1.42
CDH6P55285 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH6P55285 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH6P55285 TOMM22P4-201ENST00000511318 336 ntBASIC6.21□□□□□ -1.42
CDH6P55285 PRMT5P1-201ENST00000514351 598 ntBASIC6.21□□□□□ -1.42
CDH6P55285 HSD3BP3-201ENST00000514706 994 ntBASIC6.21□□□□□ -1.42
CDH6P55285 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH6P55285 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH6P55285 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDH6P55285 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH6P55285 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH6P55285 AC023310.2-201ENST00000553844 547 ntBASIC6.21□□□□□ -1.42
CDH6P55285 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH6P55285 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH6P55285 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
CDH6P55285 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH6P55285 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH6P55285 AL591926.1-201ENST00000620542 217 ntBASIC6.21□□□□□ -1.42
CDH6P55285 SNX18P12-201ENST00000624821 759 ntBASIC6.21□□□□□ -1.42
CDH6P55285 AP001052.1-201ENST00000626421 99 ntBASIC6.21□□□□□ -1.42
CDH6P55285 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH6P55285 AC073488.3-201ENST00000631611 778 ntBASIC6.21□□□□□ -1.42
CDH6P55285 AL359955.1-201ENST00000455242 3275 ntBASIC6.21□□□□□ -1.42
CDH6P55285 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH6P55285 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDH6P55285 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH6P55285 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDH6P55285 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH6P55285 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
CDH6P55285 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH6P55285 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH6P55285 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH6P55285 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH6P55285 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH6P55285 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH6P55285 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CDH6P55285 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH6P55285 RNA5SP514-201ENST00000363717 111 ntBASIC6.2□□□□□ -1.42
CDH6P55285 AL121977.1-201ENST00000401636 979 ntBASIC6.2□□□□□ -1.42
CDH6P55285 MIR1275-201ENST00000408770 80 ntBASIC6.2□□□□□ -1.42
CDH6P55285 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.2□□□□□ -1.42
CDH6P55285 AL590399.4-201ENST00000436561 601 ntBASIC6.2□□□□□ -1.42
CDH6P55285 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH6P55285 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH6P55285 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH6P55285 SNORA81.2-201ENST00000516868 170 ntBASIC6.2□□□□□ -1.42
CDH6P55285 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH6P55285 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH6P55285 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.2□□□□□ -1.42
CDH6P55285 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH6P55285 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.2□□□□□ -1.42
CDH6P55285 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH6P55285 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH6P55285 AC092332.1-201ENST00000563684 829 ntBASIC6.2□□□□□ -1.42
CDH6P55285 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH6P55285 MIR4502-201ENST00000580432 81 ntBASIC6.2□□□□□ -1.42
CDH6P55285 AC068768.2-201ENST00000602352 343 ntBASIC6.2□□□□□ -1.42
CDH6P55285 AL583832.1-201ENST00000603227 784 ntBASIC6.2□□□□□ -1.42
CDH6P55285 AC124916.2-201ENST00000604416 224 ntBASIC6.2□□□□□ -1.42
CDH6P55285 AC009779.8-202ENST00000607990 932 ntBASIC6.2□□□□□ -1.42
CDH6P55285 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH6P55285 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH6P55285 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH6P55285 AL596275.2-207ENST00000641188 675 ntBASIC6.2□□□□□ -1.42
CDH6P55285 HSPD1P9-201ENST00000420325 1636 ntBASIC6.2□□□□□ -1.42
CDH6P55285 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH6P55285 AC005224.3-201ENST00000584683 2140 ntBASIC6.2□□□□□ -1.42
CDH6P55285 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH6P55285 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH6P55285 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH6P55285 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH6P55285 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
CDH6P55285 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH6P55285 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
CDH6P55285 AC130304.1-201ENST00000622942 2385 ntBASIC6.2□□□□□ -1.42
CDH6P55285 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CDH6P55285 AC005261.2-201ENST00000593427 4258 ntBASIC6.19□□□□□ -1.42
CDH6P55285 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH6P55285 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDH6P55285 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH6P55285 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDH6P55285 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms