Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
CLCN3P51790 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.63□□□□□ -1.35
CLCN3P51790 OR2AF1P-201ENST00000454899 889 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 AL022319.1-201ENST00000458183 1167 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 AC023245.1-201ENST00000468501 517 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.63□□□□□ -1.35
CLCN3P51790 PPIAP19-201ENST00000486414 492 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CLCN3P51790 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 OR4A40P-201ENST00000533878 948 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 AC027667.1-201ENST00000545814 304 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 AC006530.1-201ENST00000555980 571 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 RN7SL753P-201ENST00000581238 290 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.63□□□□□ -1.35
CLCN3P51790 CYCSP1-201ENST00000604815 315 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 RPL12P48-201ENST00000605620 304 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 AL136131.3-201ENST00000607600 188 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.63□□□□□ -1.35
CLCN3P51790 uc_338.26-201ENST00000612659 160 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 AP005212.4-201ENST00000614206 710 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.63□□□□□ -1.35
CLCN3P51790 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.63□□□□□ -1.35
CLCN3P51790 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.63□□□□□ -1.35
CLCN3P51790 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.62□□□□□ -1.35
CLCN3P51790 RNF19BPY-201ENST00000458209 1550 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 NEPNP-201ENST00000404786 1371 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.62□□□□□ -1.35
CLCN3P51790 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CLCN3P51790 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 RN7SKP292-201ENST00000365522 317 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CLCN3P51790 SNORA17A-201ENST00000391185 133 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 AC245060.4-201ENST00000413293 1121 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.62□□□□□ -1.35
CLCN3P51790 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.62□□□□□ -1.35
CLCN3P51790 RPL31P15-201ENST00000449770 338 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.62□□□□□ -1.35
CLCN3P51790 AL122020.1-201ENST00000472287 459 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.62□□□□□ -1.35
CLCN3P51790 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 AC008629.2-201ENST00000503783 483 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.62□□□□□ -1.35
CLCN3P51790 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.62□□□□□ -1.35
CLCN3P51790 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.62□□□□□ -1.35
CLCN3P51790 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.62□□□□□ -1.35
CLCN3P51790 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.62□□□□□ -1.35
CLCN3P51790 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CLCN3P51790 ZNF322P1-201ENST00000568013 1209 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.62□□□□□ -1.35
CLCN3P51790 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.62□□□□□ -1.35
CLCN3P51790 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.62□□□□□ -1.35
CLCN3P51790 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.62□□□□□ -1.35
CLCN3P51790 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.62□□□□□ -1.35
CLCN3P51790 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.62□□□□□ -1.35
CLCN3P51790 SNORA17.5-201ENST00000630429 132 ntBASIC6.62□□□□□ -1.35
CLCN3P51790 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLCN3P51790 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
CLCN3P51790 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.61□□□□□ -1.35
CLCN3P51790 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.61□□□□□ -1.35
CLCN3P51790 AC008957.3-201ENST00000624112 2242 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CLCN3P51790 RNA5SP500-201ENST00000364486 119 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.61□□□□□ -1.35
CLCN3P51790 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.61□□□□□ -1.35
CLCN3P51790 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.61□□□□□ -1.35
CLCN3P51790 PTCD2P2-201ENST00000415579 1095 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.61□□□□□ -1.35
CLCN3P51790 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.61□□□□□ -1.35
CLCN3P51790 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.61□□□□□ -1.35
CLCN3P51790 TUBB4BP6-201ENST00000437576 479 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.61□□□□□ -1.35
CLCN3P51790 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.61□□□□□ -1.35
CLCN3P51790 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.61□□□□□ -1.35
CLCN3P51790 RPL23AP60-201ENST00000450011 454 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 AC104164.1-201ENST00000460282 590 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 RN7SL101P-201ENST00000496350 279 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.61□□□□□ -1.35
CLCN3P51790 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.61□□□□□ -1.35
CLCN3P51790 TPM3P3-201ENST00000521343 354 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 AC027544.3-201ENST00000535082 757 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.61□□□□□ -1.35
CLCN3P51790 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.61□□□□□ -1.35
CLCN3P51790 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.61□□□□□ -1.35
CLCN3P51790 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.61□□□□□ -1.35
CLCN3P51790 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms