Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AL049779.3-201ENST00000557141 606 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AC025857.2-201ENST00000602711 238 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 AC005899.6-201ENST00000620729 297 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AL138693.1-201ENST00000622219 129 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 MAPK10-350ENST00000641777 965 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 AC087516.1-201ENST00000561236 2428 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.3□□□□□ -1.56
CX3CR1P49238 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
CX3CR1P49238 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CX3CR1P49238 ICE2P1-201ENST00000512800 1849 ntBASIC5.3□□□□□ -1.56
CX3CR1P49238 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CR1P49238 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CR1P49238 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CR1P49238 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 OR10R3P-201ENST00000361688 942 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 SNORA77.2-201ENST00000408571 112 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 RN7SKP38-201ENST00000410782 309 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 RPS15AP30-201ENST00000420976 390 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 LINC00328-2P-201ENST00000436585 219 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 AC064862.5-201ENST00000440618 334 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 RPL12P49-201ENST00000441100 121 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 SNRPCP3-201ENST00000474888 476 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 SNRPCP11-201ENST00000492453 205 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AC112184.1-201ENST00000505179 312 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CX3CR1P49238 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AC136777.2-201ENST00000522979 358 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 OR56A7P-201ENST00000524865 941 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AP005136.2-201ENST00000583253 1049 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 AP001357.1-201ENST00000586304 1053 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.29□□□□□ -1.56
CX3CR1P49238 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CR1P49238 AC010325.3-201ENST00000641084 394 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CR1P49238 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CR1P49238 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CR1P49238 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.29□□□□□ -1.56
CX3CR1P49238 SAMM50P1-201ENST00000455403 1399 ntBASIC5.29□□□□□ -1.56
CX3CR1P49238 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CR1P49238 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CX3CR1P49238 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CX3CR1P49238 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CR1P49238 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CR1P49238 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms