Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC13P31276 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC13P31276 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HOXC13P31276 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC13P31276 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC13P31276 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HOXC13P31276 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC13P31276 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC13P31276 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 AC005225.5-201ENST00000623547 2225 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 TMSB4XP4-201ENST00000323496 618 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 OR11H13P-201ENST00000359695 979 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 RNA5SP477-201ENST00000362639 119 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 RNA5SP514-201ENST00000363717 111 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 RNU11-6P-201ENST00000391127 133 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 RPL7AP14-201ENST00000424041 802 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC13P31276 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 IGLV3-4-201ENST00000432300 244 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 OR6C71P-201ENST00000432580 913 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 AL353662.1-201ENST00000439099 327 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 AL022237.1-201ENST00000446663 358 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 RPS27AP3-201ENST00000453803 454 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC13P31276 AP002981.1-201ENST00000517692 975 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC13P31276 RPA2P3-201ENST00000533268 770 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 AC027229.1-201ENST00000583887 253 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 NPIPB1P-202ENST00000588786 828 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 VN1R81P-201ENST00000602085 372 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 AL591167.1-201ENST00000607321 456 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 AC018659.2-201ENST00000624690 715 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC13P31276 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
HOXC13P31276 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC13P31276 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC13P31276 AC083837.1-201ENST00000565297 2994 ntBASIC6.48□□□□□ -1.37
HOXC13P31276 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC13P31276 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC13P31276 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC13P31276 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXC13P31276 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC13P31276 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC13P31276 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC13P31276 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXC13P31276 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC13P31276 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.47□□□□□ -1.37
HOXC13P31276 SNORA17A-201ENST00000391185 133 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 TRGV7-201ENST00000427089 353 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 NFYAP1-201ENST00000431953 972 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 RPL23AP19-201ENST00000436229 369 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC13P31276 OR13K1P-201ENST00000444577 975 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC13P31276 AC239798.3-201ENST00000454459 408 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 RPS26P39-201ENST00000469206 341 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 DEFB109A-201ENST00000482450 265 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC13P31276 AC027308.1-201ENST00000517993 110 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC13P31276 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC13P31276 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXC13P31276 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC13P31276 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC13P31276 AP001858.2-201ENST00000536213 601 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXC13P31276 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC13P31276 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC13P31276 AC068768.2-201ENST00000602352 343 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 AC006924.1-201ENST00000610750 559 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 AP005431.1-201ENST00000618479 319 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC13P31276 SNORA17.5-201ENST00000630429 132 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC13P31276 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC13P31276 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC13P31276 RARSP1-201ENST00000542842 1418 ntBASIC6.47□□□□□ -1.37
HOXC13P31276 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms