Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
CD40LGP29965 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 MRRFP1-201ENST00000435941 1675 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.35□□□□□ -1.55
CD40LGP29965 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CD40LGP29965 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 PTCD2P2-201ENST00000415579 1095 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40LGP29965 RPSAP65-201ENST00000429660 595 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 AC108479.1-201ENST00000431142 427 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 AC242426.1-201ENST00000435270 960 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40LGP29965 RPL23AP60-201ENST00000450011 454 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 AC079193.1-201ENST00000460497 588 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 AC099340.1-201ENST00000475247 599 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 RN7SL267P-201ENST00000485107 261 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.35□□□□□ -1.55
CD40LGP29965 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40LGP29965 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.35□□□□□ -1.55
CD40LGP29965 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 SLC25A51P2-201ENST00000535708 889 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40LGP29965 LSM3P2-201ENST00000551246 273 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 PPIAP6-201ENST00000557078 499 ntBASIC5.35□□□□□ -1.55
CD40LGP29965 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.35□□□□□ -1.55
CD40LGP29965 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40LGP29965 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.35□□□□□ -1.55
CD40LGP29965 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40LGP29965 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40LGP29965 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CD40LGP29965 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40LGP29965 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40LGP29965 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40LGP29965 PSMC1P6-201ENST00000477233 1319 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CD40LGP29965 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40LGP29965 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40LGP29965 PRUNEP1-201ENST00000425846 705 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 AC009303.1-201ENST00000426307 352 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40LGP29965 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40LGP29965 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.34□□□□□ -1.55
CD40LGP29965 AC009244.1-201ENST00000450566 258 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 AC022080.2-201ENST00000452932 533 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 RN7SL72P-201ENST00000460697 269 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.34□□□□□ -1.55
CD40LGP29965 RPL23AP40-201ENST00000487630 390 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 AC069304.1-201ENST00000491593 704 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 AC093325.1-201ENST00000508378 326 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40LGP29965 AC078899.1-201ENST00000521432 1185 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
CD40LGP29965 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40LGP29965 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40LGP29965 RN7SL426P-201ENST00000579106 295 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 MIR4312-201ENST00000579909 76 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40LGP29965 AC005858.3-201ENST00000624756 589 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 AC099654.6-201ENST00000636487 512 ntBASIC5.34□□□□□ -1.55
CD40LGP29965 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40LGP29965 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40LGP29965 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CD40LGP29965 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40LGP29965 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40LGP29965 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms