Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TNFSF4P23510 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TNFSF4P23510 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
TNFSF4P23510 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 AL512353.3-201ENST00000417517 1326 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 RNA5SP65-201ENST00000363166 119 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 RNU6-584P-201ENST00000410350 95 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 HMGB3P31-201ENST00000413333 595 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 TCEA1P2-201ENST00000420496 906 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFSF4P23510 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 AL035551.1-201ENST00000446931 348 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFSF4P23510 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AL354872.1-201ENST00000456361 967 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC021074.2-201ENST00000468434 172 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC026254.2-201ENST00000475295 371 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 RN7SL654P-201ENST00000479178 292 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 RN7SL379P-201ENST00000479912 293 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 RN7SL382P-201ENST00000482631 282 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 RN7SL267P-201ENST00000485107 261 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 HMGB1P38-201ENST00000490557 577 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 GTF2IP9-201ENST00000502460 301 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 TRAV31-201ENST00000502780 342 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 PRELID3BP6-201ENST00000503839 571 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AC095057.1-201ENST00000507583 168 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AC090568.1-201ENST00000509499 856 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AC096661.1-201ENST00000515870 822 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC118942.1-201ENST00000529674 1035 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AC027667.1-201ENST00000545814 304 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC016839.1-201ENST00000578162 867 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AC134669.1-201ENST00000581275 672 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC099785.1-201ENST00000605697 437 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AC004908.1-201ENST00000606572 541 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AL121652.1-201ENST00000608851 448 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AC091768.1-201ENST00000609258 930 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC021422.1-201ENST00000621212 473 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 AC074140.1-201ENST00000621617 208 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 AC007406.5-201ENST00000570140 3170 ntBASIC5.86□□□□□ -1.47
TNFSF4P23510 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TNFSF4P23510 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNFSF4P23510 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFSF4P23510 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFSF4P23510 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFSF4P23510 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TNFSF4P23510 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TNFSF4P23510 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFSF4P23510 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFSF4P23510 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.85□□□□□ -1.47
TNFSF4P23510 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.85□□□□□ -1.47
TNFSF4P23510 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFSF4P23510 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.85□□□□□ -1.47
TNFSF4P23510 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFSF4P23510 AP005432.1-201ENST00000580891 3485 ntBASIC5.85□□□□□ -1.47
TNFSF4P23510 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFSF4P23510 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TNFSF4P23510 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
TNFSF4P23510 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFSF4P23510 AL354854.1-201ENST00000455940 1363 ntBASIC5.85□□□□□ -1.47
TNFSF4P23510 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFSF4P23510 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFSF4P23510 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFSF4P23510 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TNFSF4P23510 CYCSP17-201ENST00000407870 315 ntBASIC5.85□□□□□ -1.47
TNFSF4P23510 VTA1P1-201ENST00000414044 866 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms