Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 RNA5SP85-201ENST00000365378 119 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL035405.1-201ENST00000400795 710 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL096800.1-201ENST00000405326 893 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL365220.1-201ENST00000432923 399 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 snoU13.29-201ENST00000459370 104 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC108751.3-201ENST00000461814 1020 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 RN7SL643P-201ENST00000471845 291 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL079303.1-201ENST00000486611 463 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 Y_RNA.710-201ENST00000516975 110 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC068339.2-201ENST00000534395 618 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AP001858.2-201ENST00000536213 601 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC004223.2-201ENST00000590309 544 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 DYNLL1P1-201ENST00000595442 269 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 ABI1P1-201ENST00000603375 1120 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AF129408.1-201ENST00000608767 431 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AP000484.1-201ENST00000620067 1252 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AP003485.1-201ENST00000625093 753 ntBASIC5.7□□□□□ -1.5
TNFRSF1BP20333 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 RNA5SP375-201ENST00000362975 119 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 RNU1-49P-201ENST00000363468 159 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 MEAF6P1-201ENST00000416092 327 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AC073508.1-201ENST00000428866 656 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 IGLV3-4-201ENST00000432300 244 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 USP24P1-201ENST00000433802 779 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 MTND2P2-201ENST00000434633 945 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 Z80107.1-201ENST00000436830 412 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 RAB28P2-201ENST00000454299 641 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AL133351.3-201ENST00000454998 193 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AC063955.1-201ENST00000462872 685 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 RN7SL83P-201ENST00000468131 297 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AC093801.2-201ENST00000503966 1050 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 MINOS1P4-201ENST00000515470 318 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.69□□□□□ -1.5
TNFRSF1BP20333 TPM3P3-201ENST00000521343 354 ntBASIC5.69□□□□□ -1.5
TNFRSF1BP20333 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms