Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 U1.34-201ENST00000618578 162 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 AC123767.1-202ENST00000620407 817 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.04□□□□□ -1.12
ERCC3P19447 AC027559.1-201ENST00000636288 271 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 MTND4P8-201ENST00000514997 1362 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.04□□□□□ -1.12
ERCC3P19447 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.04□□□□□ -1.12
ERCC3P19447 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.04□□□□□ -1.12
ERCC3P19447 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
ERCC3P19447 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.03□□□□□ -1.12
ERCC3P19447 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.03□□□□□ -1.12
ERCC3P19447 AC012078.1-201ENST00000405035 1646 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
ERCC3P19447 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 DMD-211ENST00000378707 7410 ntTSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.03□□□□□ -1.12
ERCC3P19447 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 MT-TP-201ENST00000387461 68 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.03□□□□□ -1.12
ERCC3P19447 UBTFL2-201ENST00000411859 1191 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 RPL36P18-201ENST00000419316 318 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 CDC42P6-201ENST00000421246 576 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC8.03□□□□□ -1.12
ERCC3P19447 EMC3-AS1-205ENST00000438698 534 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 Z83846.1-201ENST00000446798 265 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AL121578.2-201ENST00000448797 447 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 RN7SL168P-201ENST00000463821 279 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AC004263.1-201ENST00000479327 332 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 AC015524.1-201ENST00000491585 472 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 AC023310.2-201ENST00000553844 547 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AC107958.1-201ENST00000556576 290 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 RBM22P12-201ENST00000567098 1255 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 AC011500.1-201ENST00000601963 469 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.03□□□□□ -1.12
ERCC3P19447 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.03□□□□□ -1.12
ERCC3P19447 AL158062.1-201ENST00000619632 745 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AC112694.2-201ENST00000623697 768 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AP002967.1-201ENST00000624203 539 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 GMFB-210ENST00000628554 639 ntTSL 4 BASIC8.03□□□□□ -1.12
ERCC3P19447 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 AC022819.1-201ENST00000563495 3910 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AC092821.3-202ENST00000641304 2767 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AC090181.3-201ENST00000624777 1514 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ERCC3P19447 AL133268.1-201ENST00000405676 1401 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 MAPK10-323ENST00000641493 3207 ntBASIC8.03□□□□□ -1.12
ERCC3P19447 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.03□□□□□ -1.12
ERCC3P19447 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
ERCC3P19447 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
ERCC3P19447 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
ERCC3P19447 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.02□□□□□ -1.13
ERCC3P19447 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.02□□□□□ -1.13
ERCC3P19447 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.02□□□□□ -1.13
ERCC3P19447 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.02□□□□□ -1.13
ERCC3P19447 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
ERCC3P19447 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 MIR621-201ENST00000384919 96 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 RNU6-932P-201ENST00000391108 106 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 SNORA11.3-201ENST00000408471 128 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 GTF2IP2-201ENST00000424290 697 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.02□□□□□ -1.13
ERCC3P19447 Z68868.1-201ENST00000429048 544 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.02□□□□□ -1.13
ERCC3P19447 GAPDHP19-201ENST00000431768 1005 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms