Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGA1P17096 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGA1P17096 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGA1P17096 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGA1P17096 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGA1P17096 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.13□□□□□ -1.43
HMGA1P17096 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.13□□□□□ -1.43
HMGA1P17096 AL512624.1-201ENST00000613638 469 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 AC022467.1-201ENST00000614738 749 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGA1P17096 AL049767.1-202ENST00000637826 242 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGA1P17096 AC011504.1-201ENST00000623331 4103 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGA1P17096 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGA1P17096 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HMGA1P17096 AL662795.2-201ENST00000624252 3706 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HMGA1P17096 AC027279.1-201ENST00000568885 4284 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HMGA1P17096 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGA1P17096 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HMGA1P17096 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGA1P17096 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
HMGA1P17096 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HMGA1P17096 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGA1P17096 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGA1P17096 RNA5SP46-201ENST00000362370 120 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HMGA1P17096 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 RPS17P17-201ENST00000419392 409 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 DEFA9P-201ENST00000433042 285 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGA1P17096 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 PFN1P6-201ENST00000476786 399 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 AL136038.1-201ENST00000497246 351 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGA1P17096 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.12□□□□□ -1.43
HMGA1P17096 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGA1P17096 AC068733.2-201ENST00000605434 1418 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 AL355974.3-201ENST00000617383 467 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGA1P17096 AL445670.1-201ENST00000618889 801 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGA1P17096 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HMGA1P17096 AC087565.3-203ENST00000641018 837 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 CASC19-243ENST00000641588 1546 ntBASIC6.12□□□□□ -1.43
HMGA1P17096 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGA1P17096 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGA1P17096 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HMGA1P17096 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGA1P17096 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGA1P17096 AC130304.1-201ENST00000622942 2385 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGA1P17096 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
HMGA1P17096 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 AC007842.1-201ENST00000597336 2039 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.11□□□□□ -1.43
HMGA1P17096 GAPDHP48-201ENST00000436626 961 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 AC023141.8-201ENST00000442554 208 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGA1P17096 AL603882.1-201ENST00000463059 681 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 AC009120.1-201ENST00000493458 473 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGA1P17096 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGA1P17096 RNA5SP362-201ENST00000516048 118 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 SCARNA21.2-201ENST00000516600 166 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 SNORA43.3-201ENST00000517240 103 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HMGA1P17096 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGA1P17096 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGA1P17096 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGA1P17096 MIR3176-201ENST00000582210 90 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 MIR4505-201ENST00000582238 73 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms