Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.25□□□□□ -1.57
CTLA4P16410 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.25□□□□□ -1.57
CTLA4P16410 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.25□□□□□ -1.57
CTLA4P16410 AL352984.2-202ENST00000613699 155 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 AL138960.1-201ENST00000613838 513 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 AL445670.1-201ENST00000618889 801 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.25□□□□□ -1.57
CTLA4P16410 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTLA4P16410 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CTLA4P16410 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.25□□□□□ -1.57
CTLA4P16410 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.25□□□□□ -1.57
CTLA4P16410 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTLA4P16410 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTLA4P16410 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTLA4P16410 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTLA4P16410 AC020656.2-201ENST00000613291 5309 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CTLA4P16410 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CTLA4P16410 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 RBPJP7-201ENST00000442803 1447 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 RBPJP5-201ENST00000449433 1447 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CTLA4P16410 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.24□□□□□ -1.57
CTLA4P16410 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.24□□□□□ -1.57
CTLA4P16410 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CTLA4P16410 GCNT1P4-201ENST00000404096 329 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 RN7SKP86-201ENST00000410454 332 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.24□□□□□ -1.57
CTLA4P16410 RPL35AP3-201ENST00000414680 288 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 AL359885.1-201ENST00000415786 903 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.24□□□□□ -1.57
CTLA4P16410 RPL6P21-201ENST00000418672 846 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 RPS4XP5-201ENST00000419038 768 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 RPSAP40-201ENST00000442343 891 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.24□□□□□ -1.57
CTLA4P16410 OR52I1-201ENST00000450052 1050 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 FRG2FP-204ENST00000453982 852 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 RN7SL269P-201ENST00000467795 305 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 AC023245.1-201ENST00000468501 517 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 AC093719.1-201ENST00000480427 441 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.24□□□□□ -1.57
CTLA4P16410 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.24□□□□□ -1.57
CTLA4P16410 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.24□□□□□ -1.57
CTLA4P16410 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.24□□□□□ -1.57
CTLA4P16410 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.24□□□□□ -1.57
CTLA4P16410 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.24□□□□□ -1.57
CTLA4P16410 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.24□□□□□ -1.57
CTLA4P16410 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.24□□□□□ -1.57
CTLA4P16410 GARSP1-201ENST00000570895 719 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 TXNP4-201ENST00000575018 310 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.24□□□□□ -1.57
CTLA4P16410 AP005119.1-201ENST00000580956 292 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.24□□□□□ -1.57
CTLA4P16410 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CTLA4P16410 AC004801.6-201ENST00000616571 978 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CTLA4P16410 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.24□□□□□ -1.57
CTLA4P16410 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.24□□□□□ -1.57
CTLA4P16410 AL354854.1-201ENST00000455940 1363 ntBASIC5.24□□□□□ -1.57
CTLA4P16410 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CTLA4P16410 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CTLA4P16410 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTLA4P16410 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTLA4P16410 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.23□□□□□ -1.57
CTLA4P16410 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTLA4P16410 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTLA4P16410 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTLA4P16410 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTLA4P16410 SELENOWP1-201ENST00000322792 252 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 RN7SKP77-201ENST00000363261 353 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CTLA4P16410 SNORA51.9-201ENST00000384295 124 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 AL096711.1-201ENST00000404780 554 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 OR2W4P-201ENST00000406496 926 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.23□□□□□ -1.57
CTLA4P16410 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.23□□□□□ -1.57
CTLA4P16410 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.23□□□□□ -1.57
CTLA4P16410 AK3P5-201ENST00000432033 519 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 AC096775.1-201ENST00000437724 448 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 BMS1P10-201ENST00000443754 1120 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 RPL5P7-201ENST00000444235 813 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 AC097463.1-201ENST00000447288 481 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 AC091874.2-201ENST00000505889 720 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 AC018797.1-201ENST00000510791 255 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.23□□□□□ -1.57
CTLA4P16410 RN7SKP35-201ENST00000517210 151 ntBASIC5.23□□□□□ -1.57
CTLA4P16410 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTLA4P16410 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms