Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.08□□□□□ -1.28
TOP1P11387 AP004609.2-201ENST00000532177 190 ntBASIC7.08□□□□□ -1.28
TOP1P11387 MIR4310-201ENST00000582950 57 ntBASIC7.08□□□□□ -1.28
TOP1P11387 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.08□□□□□ -1.28
TOP1P11387 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.08□□□□□ -1.28
TOP1P11387 AL096712.1-201ENST00000614561 159 ntBASIC7.08□□□□□ -1.28
TOP1P11387 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TOP1P11387 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TOP1P11387 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.08□□□□□ -1.28
TOP1P11387 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.08□□□□□ -1.28
TOP1P11387 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.08□□□□□ -1.28
TOP1P11387 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.08□□□□□ -1.28
TOP1P11387 RBPJP7-201ENST00000442803 1447 ntBASIC7.08□□□□□ -1.28
TOP1P11387 RBPJP5-201ENST00000449433 1447 ntBASIC7.08□□□□□ -1.28
TOP1P11387 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TOP1P11387 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.08□□□□□ -1.28
TOP1P11387 AC005725.1-201ENST00000577346 2607 ntBASIC7.08□□□□□ -1.28
TOP1P11387 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TOP1P11387 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TOP1P11387 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
TOP1P11387 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TOP1P11387 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TOP1P11387 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TOP1P11387 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TOP1P11387 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TOP1P11387 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TOP1P11387 RNU1-59P-201ENST00000364829 162 ntBASIC7.07□□□□□ -1.28
TOP1P11387 SNORA11.3-201ENST00000408471 128 ntBASIC7.07□□□□□ -1.28
TOP1P11387 PTCD2P2-201ENST00000415579 1095 ntBASIC7.07□□□□□ -1.28
TOP1P11387 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.07□□□□□ -1.28
TOP1P11387 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.07□□□□□ -1.28
TOP1P11387 RPL34P27-201ENST00000428810 349 ntBASIC7.07□□□□□ -1.28
TOP1P11387 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.07□□□□□ -1.28
TOP1P11387 RAB28P2-201ENST00000454299 641 ntBASIC7.07□□□□□ -1.28
TOP1P11387 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.07□□□□□ -1.28
TOP1P11387 RN7SL193P-201ENST00000491708 276 ntBASIC7.07□□□□□ -1.28
TOP1P11387 AC083795.1-201ENST00000491760 320 ntBASIC7.07□□□□□ -1.28
TOP1P11387 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.07□□□□□ -1.28
TOP1P11387 SCARNA18.1-201ENST00000516330 83 ntBASIC7.07□□□□□ -1.28
TOP1P11387 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.07□□□□□ -1.28
TOP1P11387 AC110056.1-201ENST00000525759 911 ntBASIC7.07□□□□□ -1.28
TOP1P11387 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.07□□□□□ -1.28
TOP1P11387 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.07□□□□□ -1.28
TOP1P11387 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.07□□□□□ -1.28
TOP1P11387 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.07□□□□□ -1.28
TOP1P11387 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.07□□□□□ -1.28
TOP1P11387 AC119403.2-201ENST00000590960 598 ntBASIC7.07□□□□□ -1.28
TOP1P11387 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.07□□□□□ -1.28
TOP1P11387 MIR6793-201ENST00000612376 63 ntBASIC7.07□□□□□ -1.28
TOP1P11387 U1.25-201ENST00000614085 162 ntBASIC7.07□□□□□ -1.28
TOP1P11387 U1.34-201ENST00000618578 162 ntBASIC7.07□□□□□ -1.28
TOP1P11387 SNORA11.6-201ENST00000619030 128 ntBASIC7.07□□□□□ -1.28
TOP1P11387 U1.31-201ENST00000620022 160 ntBASIC7.07□□□□□ -1.28
TOP1P11387 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.07□□□□□ -1.28
TOP1P11387 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.07□□□□□ -1.28
TOP1P11387 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TOP1P11387 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TOP1P11387 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TOP1P11387 USP9YP3-201ENST00000434481 1766 ntBASIC7.07□□□□□ -1.28
TOP1P11387 CCAT2-201ENST00000630920 1752 ntBASIC7.07□□□□□ -1.28
TOP1P11387 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.07□□□□□ -1.28
TOP1P11387 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TOP1P11387 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TOP1P11387 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TOP1P11387 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TOP1P11387 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TOP1P11387 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TOP1P11387 AC012254.3-201ENST00000591183 2117 ntBASIC7.06□□□□□ -1.28
TOP1P11387 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TOP1P11387 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TOP1P11387 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TOP1P11387 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 RN7SKP151-201ENST00000410230 316 ntBASIC7.06□□□□□ -1.28
TOP1P11387 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.06□□□□□ -1.28
TOP1P11387 VN1R110P-201ENST00000438988 971 ntBASIC7.06□□□□□ -1.28
TOP1P11387 RPL12P11-201ENST00000439970 501 ntBASIC7.06□□□□□ -1.28
TOP1P11387 RN7SL352P-201ENST00000466002 277 ntBASIC7.06□□□□□ -1.28
TOP1P11387 RN7SL269P-201ENST00000467795 305 ntBASIC7.06□□□□□ -1.28
TOP1P11387 RPL12P24-201ENST00000474907 486 ntBASIC7.06□□□□□ -1.28
TOP1P11387 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.06□□□□□ -1.28
TOP1P11387 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 Y_RNA.667-201ENST00000516212 107 ntBASIC7.06□□□□□ -1.28
TOP1P11387 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.06□□□□□ -1.28
TOP1P11387 TPM3P3-201ENST00000521343 354 ntBASIC7.06□□□□□ -1.28
TOP1P11387 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.06□□□□□ -1.28
TOP1P11387 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.06□□□□□ -1.28
TOP1P11387 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 AC027334.1-201ENST00000603257 310 ntBASIC7.06□□□□□ -1.28
TOP1P11387 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TOP1P11387 AC129915.3-201ENST00000634128 948 ntBASIC7.06□□□□□ -1.28
TOP1P11387 AF287957.1-201ENST00000607368 1595 ntBASIC7.06□□□□□ -1.28
TOP1P11387 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TOP1P11387 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TOP1P11387 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms