Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
COL1A1P02452 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
COL1A1P02452 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.12□□□□□ -1.27
COL1A1P02452 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.12□□□□□ -1.27
COL1A1P02452 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 AC006511.3-201ENST00000624929 1783 ntBASIC7.12□□□□□ -1.27
COL1A1P02452 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL1A1P02452 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL1A1P02452 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 SPRYD7P1-201ENST00000443861 570 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 RAB28P2-201ENST00000454299 641 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.11□□□□□ -1.27
COL1A1P02452 RN7SL72P-201ENST00000460697 269 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 AL133445.1-201ENST00000467051 452 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 SIAH1P1-201ENST00000479411 923 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 CCDC11P1-201ENST00000503137 1162 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.11□□□□□ -1.27
COL1A1P02452 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.11□□□□□ -1.27
COL1A1P02452 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.11□□□□□ -1.27
COL1A1P02452 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.11□□□□□ -1.27
COL1A1P02452 MIR4505-201ENST00000582238 73 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 AL355974.3-201ENST00000617383 467 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.11□□□□□ -1.27
COL1A1P02452 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.11□□□□□ -1.27
COL1A1P02452 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL1A1P02452 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.11□□□□□ -1.27
COL1A1P02452 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL1A1P02452 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL1A1P02452 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL1A1P02452 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
COL1A1P02452 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL1A1P02452 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL1A1P02452 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL1A1P02452 AC010401.2-201ENST00000575137 4934 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 AC110716.2-201ENST00000563865 3945 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL1A1P02452 U3.7-201ENST00000363668 216 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 SNORD8-201ENST00000363915 110 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.11□□□□□ -1.27
COL1A1P02452 AP003170.5-201ENST00000397185 335 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 AC116036.1-201ENST00000412199 367 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.11□□□□□ -1.27
COL1A1P02452 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 AC007394.1-201ENST00000421941 531 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 AL731534.1-201ENST00000434711 269 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 EEF1B2P6-201ENST00000445713 673 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 LRRC37A14P-201ENST00000452297 462 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.11□□□□□ -1.27
COL1A1P02452 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.11□□□□□ -1.27
COL1A1P02452 AC087565.3-203ENST00000641018 837 ntBASIC7.11□□□□□ -1.27
COL1A1P02452 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.11□□□□□ -1.27
COL1A1P02452 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
COL1A1P02452 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
COL1A1P02452 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL1A1P02452 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.1□□□□□ -1.27
COL1A1P02452 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.1□□□□□ -1.27
COL1A1P02452 LINC01963-201ENST00000562038 3148 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL1A1P02452 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL1A1P02452 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL1A1P02452 AL590763.1-201ENST00000398297 1545 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 CASC19-243ENST00000641588 1546 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
COL1A1P02452 RN7SKP124-201ENST00000364730 341 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 RN7SKP151-201ENST00000410230 316 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 AL662874.1-201ENST00000426065 230 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 DEFA9P-201ENST00000433042 285 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
COL1A1P02452 UBA52P7-201ENST00000486088 380 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 OR7E157P-201ENST00000494376 911 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 DUTP7-201ENST00000507982 486 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.1□□□□□ -1.27
COL1A1P02452 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms