Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CNOT4O95628 GSTA12P-201ENST00000402398 508 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AL157698.1-201ENST00000415190 1011 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 VDAC1P10-201ENST00000416715 891 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 DPPA2P2-201ENST00000418220 897 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.33□□□□□ -1.4
CNOT4O95628 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.33□□□□□ -1.4
CNOT4O95628 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.33□□□□□ -1.4
CNOT4O95628 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.33□□□□□ -1.4
CNOT4O95628 AC005345.1-201ENST00000431868 217 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AL606490.7-201ENST00000433136 191 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AC007563.3-201ENST00000433233 371 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.33□□□□□ -1.4
CNOT4O95628 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.33□□□□□ -1.4
CNOT4O95628 DBIL5P2-201ENST00000443827 253 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AL133217.1-201ENST00000450980 425 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 PTGES3P5-201ENST00000455109 434 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 RPL31P3-201ENST00000458430 332 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CNOT4O95628 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNOT4O95628 AC091982.1-202ENST00000473923 343 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.33□□□□□ -1.4
CNOT4O95628 HPRT1P1-201ENST00000509498 657 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 UGT2A3P7-201ENST00000510485 734 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AC010625.1-201ENST00000511296 403 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 SCARNA11.1-201ENST00000516918 132 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AC120036.3-201ENST00000517826 292 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 MTND1P5-201ENST00000517906 940 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.33□□□□□ -1.4
CNOT4O95628 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AP001803.1-201ENST00000525668 147 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.33□□□□□ -1.4
CNOT4O95628 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 SAA3P-201ENST00000533267 365 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.33□□□□□ -1.4
CNOT4O95628 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.33□□□□□ -1.4
CNOT4O95628 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CNOT4O95628 AC007346.2-201ENST00000564816 892 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AC025283.1-201ENST00000572039 734 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AC012213.3-201ENST00000577199 777 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 MIR3135A-201ENST00000578460 77 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.33□□□□□ -1.4
CNOT4O95628 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.33□□□□□ -1.4
CNOT4O95628 AC092032.1-201ENST00000603090 165 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 Z82195.1-201ENST00000604558 398 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AL031777.2-201ENST00000611953 196 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 MIR6889-201ENST00000613185 59 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.33□□□□□ -1.4
CNOT4O95628 AC123767.1-202ENST00000620407 817 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 AL390318.1-201ENST00000624564 687 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 MIR665-201ENST00000635949 72 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CNOT4O95628 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 CTAGE11P-201ENST00000451540 2353 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 AC053481.2-202ENST00000582394 1500 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CNOT4O95628 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CNOT4O95628 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNOT4O95628 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNOT4O95628 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNOT4O95628 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.33□□□□□ -1.4
CNOT4O95628 AC061975.5-201ENST00000584928 1441 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CNOT4O95628 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.33□□□□□ -1.4
CNOT4O95628 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.33□□□□□ -1.4
CNOT4O95628 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNOT4O95628 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNOT4O95628 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.32□□□□□ -1.4
CNOT4O95628 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNOT4O95628 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.32□□□□□ -1.4
CNOT4O95628 AC025263.3-201ENST00000622965 1396 ntBASIC6.32□□□□□ -1.4
CNOT4O95628 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNOT4O95628 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNOT4O95628 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.32□□□□□ -1.4
CNOT4O95628 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CNOT4O95628 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
CNOT4O95628 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.32□□□□□ -1.4
CNOT4O95628 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNOT4O95628 AL034417.4-202ENST00000642135 2236 ntBASIC6.32□□□□□ -1.4
CNOT4O95628 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNOT4O95628 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNOT4O95628 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CNOT4O95628 RNU6-1214P-201ENST00000363650 109 ntBASIC6.32□□□□□ -1.4
CNOT4O95628 FAM204BP-201ENST00000369171 701 ntBASIC6.32□□□□□ -1.4
CNOT4O95628 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CNOT4O95628 RNU6-1055P-201ENST00000391085 107 ntBASIC6.32□□□□□ -1.4
CNOT4O95628 RNU1-56P-201ENST00000391303 164 ntBASIC6.32□□□□□ -1.4
CNOT4O95628 YWHAZP4-201ENST00000392459 708 ntBASIC6.32□□□□□ -1.4
CNOT4O95628 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNOT4O95628 AC008171.1-201ENST00000395058 200 ntBASIC6.32□□□□□ -1.4
CNOT4O95628 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms