Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1BO75841 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 AC234771.2-201ENST00000445718 597 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC5.04□□□□□ -1.6
UPK1BO75841 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 PRPF38AP1-201ENST00000451976 933 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 RNA5SP103-201ENST00000459503 118 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AC126615.1-201ENST00000470084 630 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 RPS4XP17-201ENST00000479057 754 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 RN7SL182P-201ENST00000496499 300 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1BO75841 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK1BO75841 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 MTCYBP13-201ENST00000578634 1093 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 RPL7AP69-201ENST00000595306 806 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 AL356608.1-201ENST00000610034 820 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
UPK1BO75841 AL035661.1-201ENST00000620459 1144 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 RAB28P4-201ENST00000622233 665 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AC007347.2-201ENST00000623044 180 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AC090099.1-204ENST00000623626 849 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1BO75841 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
UPK1BO75841 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1BO75841 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 RBMY1HP-201ENST00000382759 1389 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 AC006600.2-201ENST00000624834 2506 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
UPK1BO75841 SMG1P4-204ENST00000523028 4131 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AL034549.2-201ENST00000618285 3373 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK1BO75841 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 AL078621.3-201ENST00000623707 2042 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UPK1BO75841 RNA5SP355-201ENST00000365317 135 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 MIR99A-201ENST00000384906 81 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UPK1BO75841 RPL21P67-201ENST00000402896 478 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AC004129.1-201ENST00000417617 796 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK1BO75841 AC000089.1-201ENST00000424559 801 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 GAPDHP75-201ENST00000433910 943 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 PCBP2P1-201ENST00000437262 977 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 EIF5AP4-201ENST00000441206 465 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AL020997.1-201ENST00000446554 349 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.03□□□□□ -1.6
UPK1BO75841 AL928654.1-201ENST00000476081 354 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 RN7SL702P-201ENST00000488394 292 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 RN7SL519P-201ENST00000497925 288 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AC124891.1-201ENST00000536322 519 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK1BO75841 AL390726.5-202ENST00000564800 256 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 OOSP1P2-201ENST00000579644 351 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 PRPF19P1-201ENST00000584766 898 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK1BO75841 AC008592.5-201ENST00000607856 547 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 MIR665-201ENST00000635949 72 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK1BO75841 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1BO75841 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1BO75841 AL449283.1-201ENST00000602631 3403 ntBASIC5.03□□□□□ -1.6
UPK1BO75841 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UPK1BO75841 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.02□□□□□ -1.61
UPK1BO75841 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
UPK1BO75841 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UPK1BO75841 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms