Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 AC079809.1-201ENST00000415468 276 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 GPN3P1-201ENST00000423883 535 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 GAPDHP37-201ENST00000442317 968 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 RPS7P4-201ENST00000444127 582 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 RPS23P9-201ENST00000448848 438 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.75□□□□□ -1.65
SSSCA1O60232 RNU1-88P-201ENST00000459274 128 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.75□□□□□ -1.65
SSSCA1O60232 GAPDHP62-201ENST00000515313 990 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 NATP-201ENST00000523491 878 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 OR7E158P-201ENST00000524483 910 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 OR4A42P-201ENST00000531397 938 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 VDAC2P2-201ENST00000544463 901 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 RPL41P2-201ENST00000544920 409 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.75□□□□□ -1.65
SSSCA1O60232 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.75□□□□□ -1.65
SSSCA1O60232 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AC010503.3-201ENST00000594355 540 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AC125494.2-201ENST00000602431 657 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 MIR6811-201ENST00000620409 58 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 AP003108.4-201ENST00000623917 878 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.75□□□□□ -1.65
SSSCA1O60232 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.75□□□□□ -1.65
SSSCA1O60232 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AC104964.3-201ENST00000606115 2860 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SSSCA1O60232 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
SSSCA1O60232 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SSSCA1O60232 AC009962.1-201ENST00000567327 3813 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 AP004607.3-201ENST00000530354 3915 ntBASIC4.75□□□□□ -1.65
SSSCA1O60232 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSSCA1O60232 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SSSCA1O60232 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 MAPK10-328ENST00000641553 4009 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 RN7SKP78-201ENST00000364711 318 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AL157702.1-201ENST00000398764 426 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 SNRPEP6-201ENST00000407465 277 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 SETP9-201ENST00000423837 832 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 RPL12P12-201ENST00000424633 501 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 NPM1P23-201ENST00000440193 849 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 RPS10P14-201ENST00000440748 502 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 BMS1P11-201ENST00000442351 885 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 ZNF619P1-201ENST00000446539 752 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 AC099670.1-201ENST00000455141 783 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 BMS1P9-201ENST00000457640 885 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 RN7SL39P-201ENST00000462264 297 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 AC009567.2-201ENST00000502989 349 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC135983.3-201ENST00000528049 1226 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC037479.1-201ENST00000558361 625 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC015674.1-201ENST00000578482 267 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms