Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
MSI1O43347 AOX3P-204ENST00000491025 2107 ntBASIC6.4□□□□□ -1.39
MSI1O43347 LYARP1-201ENST00000436977 1501 ntBASIC6.4□□□□□ -1.39
MSI1O43347 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
MSI1O43347 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.39□□□□□ -1.39
MSI1O43347 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 RPS7P8-201ENST00000418311 581 ntBASIC6.39□□□□□ -1.39
MSI1O43347 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.39□□□□□ -1.39
MSI1O43347 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.39□□□□□ -1.39
MSI1O43347 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.39□□□□□ -1.39
MSI1O43347 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.39□□□□□ -1.39
MSI1O43347 AC009963.3-201ENST00000458090 486 ntBASIC6.39□□□□□ -1.39
MSI1O43347 AC068228.1-201ENST00000461723 211 ntBASIC6.39□□□□□ -1.39
MSI1O43347 AC098847.1-201ENST00000473094 348 ntBASIC6.39□□□□□ -1.39
MSI1O43347 RBBP4P1-201ENST00000502424 1276 ntBASIC6.39□□□□□ -1.39
MSI1O43347 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.39□□□□□ -1.39
MSI1O43347 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.39□□□□□ -1.39
MSI1O43347 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.39□□□□□ -1.39
MSI1O43347 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.39□□□□□ -1.39
MSI1O43347 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.39□□□□□ -1.39
MSI1O43347 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.39□□□□□ -1.39
MSI1O43347 OR4H6P-201ENST00000563771 921 ntBASIC6.39□□□□□ -1.39
MSI1O43347 MIR4310-201ENST00000582950 57 ntBASIC6.39□□□□□ -1.39
MSI1O43347 AC087468.1-201ENST00000604365 630 ntBASIC6.39□□□□□ -1.39
MSI1O43347 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.39□□□□□ -1.39
MSI1O43347 AC003992.1-201ENST00000635364 557 ntBASIC6.39□□□□□ -1.39
MSI1O43347 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
MSI1O43347 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
MSI1O43347 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.39□□□□□ -1.39
MSI1O43347 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
MSI1O43347 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 HSPD1P9-201ENST00000420325 1636 ntBASIC6.39□□□□□ -1.39
MSI1O43347 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
MSI1O43347 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.38□□□□□ -1.39
MSI1O43347 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.38□□□□□ -1.39
MSI1O43347 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.38□□□□□ -1.39
MSI1O43347 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.38□□□□□ -1.39
MSI1O43347 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.38□□□□□ -1.39
MSI1O43347 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.38□□□□□ -1.39
MSI1O43347 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.38□□□□□ -1.39
MSI1O43347 RPL6P30-201ENST00000443382 862 ntBASIC6.38□□□□□ -1.39
MSI1O43347 AL512593.1-201ENST00000444758 779 ntBASIC6.38□□□□□ -1.39
MSI1O43347 RPL5P10-201ENST00000445207 894 ntBASIC6.38□□□□□ -1.39
MSI1O43347 ZNF619P1-201ENST00000446539 752 ntBASIC6.38□□□□□ -1.39
MSI1O43347 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.38□□□□□ -1.39
MSI1O43347 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.38□□□□□ -1.39
MSI1O43347 PFN1P8-201ENST00000497012 543 ntBASIC6.38□□□□□ -1.39
MSI1O43347 RN7SKP70-201ENST00000516655 271 ntBASIC6.38□□□□□ -1.39
MSI1O43347 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.38□□□□□ -1.39
MSI1O43347 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.38□□□□□ -1.39
MSI1O43347 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.38□□□□□ -1.39
MSI1O43347 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.38□□□□□ -1.39
MSI1O43347 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.38□□□□□ -1.39
MSI1O43347 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.38□□□□□ -1.39
MSI1O43347 AC090888.3-201ENST00000558917 509 ntBASIC6.38□□□□□ -1.39
MSI1O43347 AC092332.1-201ENST00000563684 829 ntBASIC6.38□□□□□ -1.39
MSI1O43347 AC090826.1-203ENST00000569235 490 ntBASIC6.38□□□□□ -1.39
MSI1O43347 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.38□□□□□ -1.39
MSI1O43347 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.38□□□□□ -1.39
MSI1O43347 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.38□□□□□ -1.39
MSI1O43347 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.38□□□□□ -1.39
MSI1O43347 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.38□□□□□ -1.39
MSI1O43347 PSG10P-201ENST00000501199 1500 ntBASIC6.38□□□□□ -1.39
MSI1O43347 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.38□□□□□ -1.39
MSI1O43347 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.38□□□□□ -1.39
MSI1O43347 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSI1O43347 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
MSI1O43347 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.38□□□□□ -1.39
MSI1O43347 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
MSI1O43347 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MSI1O43347 IMMTP1-201ENST00000435590 2219 ntBASIC6.37□□□□□ -1.39
MSI1O43347 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms