Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM38O00635 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
TRIM38O00635 FUNDC2P3-201ENST00000334716 533 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM38O00635 SNORA70.9-201ENST00000384370 135 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM38O00635 AL929472.1-201ENST00000417484 429 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM38O00635 MRPS21P3-201ENST00000436696 262 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 AC074367.1-201ENST00000438685 1125 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 H3F3BP1-201ENST00000440551 403 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 GTF2IP14-201ENST00000441415 586 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 Z83838.1-202ENST00000456225 839 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 NDUFA5P5-201ENST00000468361 342 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 AC092824.1-201ENST00000483524 576 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM38O00635 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM38O00635 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRIM38O00635 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM38O00635 RPL3P13-201ENST00000550415 216 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM38O00635 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM38O00635 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM38O00635 AC011921.2-201ENST00000589465 152 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRIM38O00635 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM38O00635 MIMT1-201ENST00000597105 1050 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 AC004805.3-201ENST00000603178 310 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM38O00635 AC090506.2-201ENST00000624521 419 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 SMG1P5-202ENST00000529428 4219 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 SMG1P2-201ENST00000566127 4221 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM38O00635 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM38O00635 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM38O00635 CASC19-238ENST00000641523 1558 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 AC092111.2-201ENST00000611627 1414 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TRIM38O00635 AC105749.1-201ENST00000631338 2008 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 AC005225.5-201ENST00000623547 2225 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM38O00635 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM38O00635 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM38O00635 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM38O00635 GCNT1P4-201ENST00000404096 329 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM38O00635 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM38O00635 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM38O00635 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM38O00635 AL691517.1-201ENST00000440833 1235 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM38O00635 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM38O00635 MTND3P3-201ENST00000505004 126 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 RFPL4AP3-201ENST00000515267 345 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 SUMO2P19-201ENST00000518920 295 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM38O00635 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM38O00635 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM38O00635 AC020978.7-201ENST00000575953 1187 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 MTND2P13-201ENST00000577438 1039 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 AC026898.1-201ENST00000586404 571 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM38O00635 GLYATL1P2-202ENST00000588046 902 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM38O00635 AC068313.1-201ENST00000604028 1008 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 BNIP3P35-201ENST00000604530 490 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 AC004908.3-201ENST00000610248 625 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 AC025262.3-201ENST00000623666 360 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM38O00635 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM38O00635 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 HSPD1P8-201ENST00000400121 1658 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM38O00635 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 ZNF402P-201ENST00000404435 3100 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM38O00635 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 AC068446.1-201ENST00000556425 1549 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 MTCO1P28-201ENST00000574177 1528 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM38O00635 AC022613.3-201ENST00000560740 1346 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms