Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC091874.2-201ENST00000505889 720 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
UPK1AO00322 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.64□□□□□ -1.51
UPK1AO00322 OR56A7P-201ENST00000524865 941 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 AP000620.1-201ENST00000527147 504 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UPK1AO00322 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.64□□□□□ -1.51
UPK1AO00322 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.64□□□□□ -1.51
UPK1AO00322 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.64□□□□□ -1.51
UPK1AO00322 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.64□□□□□ -1.51
UPK1AO00322 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.64□□□□□ -1.51
UPK1AO00322 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.64□□□□□ -1.51
UPK1AO00322 AC006115.2-201ENST00000596823 202 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 AL357562.1-201ENST00000624911 609 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.64□□□□□ -1.51
UPK1AO00322 AC114774.1-201ENST00000507410 1770 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
UPK1AO00322 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UPK1AO00322 RBMY1HP-201ENST00000382759 1389 ntBASIC5.64□□□□□ -1.51
UPK1AO00322 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
UPK1AO00322 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
UPK1AO00322 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UPK1AO00322 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UPK1AO00322 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
UPK1AO00322 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.63□□□□□ -1.51
UPK1AO00322 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
UPK1AO00322 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.63□□□□□ -1.51
UPK1AO00322 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.63□□□□□ -1.51
UPK1AO00322 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
UPK1AO00322 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 OR10R3P-201ENST00000361688 942 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.63□□□□□ -1.51
UPK1AO00322 AC009506.2-201ENST00000420635 840 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 TRIM60P16-201ENST00000444048 694 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 REG1CP-206ENST00000447469 496 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.63□□□□□ -1.51
UPK1AO00322 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.63□□□□□ -1.51
UPK1AO00322 AC018797.1-201ENST00000510791 255 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.63□□□□□ -1.51
UPK1AO00322 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.63□□□□□ -1.51
UPK1AO00322 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.63□□□□□ -1.51
UPK1AO00322 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 AC023310.2-201ENST00000553844 547 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.63□□□□□ -1.51
UPK1AO00322 AC007346.1-201ENST00000569208 867 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.63□□□□□ -1.51
UPK1AO00322 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.63□□□□□ -1.51
UPK1AO00322 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
UPK1AO00322 AC073333.2-201ENST00000603589 769 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.63□□□□□ -1.51
UPK1AO00322 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 AC079776.5-201ENST00000641920 211 ntBASIC5.63□□□□□ -1.51
UPK1AO00322 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
UPK1AO00322 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.63□□□□□ -1.51
UPK1AO00322 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.63□□□□□ -1.51
UPK1AO00322 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.63□□□□□ -1.51
UPK1AO00322 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPK1AO00322 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
UPK1AO00322 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
UPK1AO00322 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
UPK1AO00322 AC130304.1-201ENST00000622942 2385 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.62□□□□□ -1.51
UPK1AO00322 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
UPK1AO00322 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
UPK1AO00322 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.62□□□□□ -1.51
UPK1AO00322 GCNT1P4-201ENST00000404096 329 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.62□□□□□ -1.51
UPK1AO00322 MYL6P5-201ENST00000412707 459 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 METTL15P3-201ENST00000415522 1221 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 AL158827.1-201ENST00000416300 391 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 AL353662.1-201ENST00000439099 327 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 RPL5P7-201ENST00000444235 813 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.62□□□□□ -1.51
UPK1AO00322 TIMM8BP2-201ENST00000445940 251 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 SDC4P-201ENST00000453285 601 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 FRG2FP-204ENST00000453982 852 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 ACA64.4-201ENST00000459070 127 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 PDCL3P4-201ENST00000489621 720 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms