Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 RNA5SP346-201ENST00000363541 121 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 RNA5SP514-201ENST00000363717 111 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 YWHAZP4-201ENST00000392459 708 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AL121835.1-201ENST00000404250 354 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AL589655.1-201ENST00000405398 482 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 RPS26P38-201ENST00000414476 348 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC015977.1-201ENST00000418887 292 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC016027.5-201ENST00000427227 210 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 GAPDHP75-201ENST00000433910 943 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC094019.1-201ENST00000434678 472 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 BX679664.2-201ENST00000439282 283 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AL445687.2-201ENST00000458156 728 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 RN7SL393P-201ENST00000463588 296 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 Y_RNA.710-201ENST00000516975 110 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 CYCSP25-201ENST00000525280 316 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AP001804.2-201ENST00000533932 910 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 HMGN2P47-201ENST00000559378 272 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 MIR4433B-201ENST00000581329 102 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 GLYATL1P2-202ENST00000588046 902 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC026367.3-201ENST00000619032 590 ntBASIC4.97□□□□□ -1.61
SRRM4A7MD48 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
SRRM4A7MD48 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SRRM4A7MD48 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SRRM4A7MD48 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SRRM4A7MD48 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SRRM4A7MD48 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
SRRM4A7MD48 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SRRM4A7MD48 AC022164.1-201ENST00000568767 2673 ntBASIC4.96□□□□□ -1.62
SRRM4A7MD48 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SRRM4A7MD48 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SRRM4A7MD48 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
SRRM4A7MD48 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SRRM4A7MD48 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SRRM4A7MD48 RPL11P4-201ENST00000332269 436 ntBASIC4.96□□□□□ -1.62
SRRM4A7MD48 SNORA64.3-201ENST00000365647 134 ntBASIC4.96□□□□□ -1.62
SRRM4A7MD48 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.96□□□□□ -1.62
SRRM4A7MD48 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SRRM4A7MD48 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SRRM4A7MD48 RPL7P58-201ENST00000402913 758 ntBASIC4.96□□□□□ -1.62
SRRM4A7MD48 MTATP6P19-201ENST00000413797 659 ntBASIC4.96□□□□□ -1.62
SRRM4A7MD48 AL445528.1-201ENST00000426330 420 ntBASIC4.96□□□□□ -1.62
SRRM4A7MD48 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.96□□□□□ -1.62
SRRM4A7MD48 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SRRM4A7MD48 GAPDHP19-201ENST00000431768 1005 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms