Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TXNP4-201ENST00000575018 310 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC060780.2-201ENST00000589047 198 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC006115.2-201ENST00000596823 202 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 uc_338.29-201ENST00000615099 168 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AL445670.1-201ENST00000618889 801 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC069542.2-201ENST00000624816 216 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AL357140.4-201ENST00000636827 412 ntBASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRAV27A0A087WT01 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 GNL2P1-201ENST00000451274 2190 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 FBXL21-201ENST00000297158 1305 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 RPSAP65-201ENST00000429660 595 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AL353662.1-201ENST00000439099 327 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AL445466.1-201ENST00000448432 357 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 IGKV2-19-201ENST00000518132 283 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 OR4A42P-201ENST00000531397 938 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AC126615.2-201ENST00000553003 515 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AL133481.2-203ENST00000607558 139 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 FAM27E2-201ENST00000619668 403 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 AC073488.3-201ENST00000631611 778 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 PSG10P-201ENST00000501199 1500 ntBASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRAV27A0A087WT01 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC008627.1-201ENST00000517511 1704 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AP004607.3-201ENST00000530354 3915 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 RPS4XP5-201ENST00000419038 768 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 CRIP1P1-201ENST00000427567 185 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AK3P5-201ENST00000432033 519 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC096775.1-201ENST00000437724 448 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 KF459542.1-201ENST00000450908 553 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC004129.2-201ENST00000457229 287 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 RN7SL254P-201ENST00000460609 284 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC006539.1-201ENST00000481419 501 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC112484.3-201ENST00000505910 329 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 RN7SL230P-201ENST00000580835 303 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms