Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CYCSP1-201ENST00000604815 315 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC097467.4-201ENST00000605504 141 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AL513218.1-201ENST00000606527 391 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC093635.1-201ENST00000609028 555 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AP001962.1-201ENST00000624114 559 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC018692.2-201ENST00000624130 348 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC114546.4-201ENST00000624413 369 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC099654.8-201ENST00000637757 681 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 ABCA11P-202ENST00000504019 2110 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 API5P1-201ENST00000424316 1510 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AP003486.1-201ENST00000525716 3994 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 Z83820.1-201ENST00000456978 1499 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC093909.5-201ENST00000621839 1799 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 FAM32BP-201ENST00000344033 333 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC007068.1-201ENST00000396690 844 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 VN1R51P-201ENST00000411675 945 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AL359092.1-201ENST00000417156 265 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AL606495.1-201ENST00000422100 813 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 PSMD10P2-201ENST00000432890 672 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC007563.3-201ENST00000433233 371 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC046176.1-201ENST00000435260 1170 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 UBBP5-201ENST00000446970 266 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC068522.1-201ENST00000482895 345 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 UBE2V1P12-201ENST00000503954 474 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 HMGN1P16-201ENST00000508308 283 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 RNU5A-7P-201ENST00000515979 116 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 SOX5P1-201ENST00000524155 1127 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 OR7E13P-201ENST00000526052 910 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC026826.3-201ENST00000561747 158 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC005632.2-201ENST00000564271 828 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC079315.1-201ENST00000602952 623 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AP004372.1-201ENST00000604842 844 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC013437.2-201ENST00000639587 677 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AL132656.3-201ENST00000606384 1595 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 AC106754.1-201ENST00000562632 1513 ntBASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHB1Q9Y5F3 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 PSMC1P6-201ENST00000477233 1319 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 CDY5P-201ENST00000411487 1580 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 CDY9P-201ENST00000451397 1580 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms