Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC010857.1-201ENST00000606398 594 ntBASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
RIMBP3Q9UFD9 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 AC119674.1-204ENST00000641348 1343 ntBASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 RNA5SP388-201ENST00000362584 119 ntBASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 AL139156.3-201ENST00000454802 394 ntBASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 RPL7P16-201ENST00000479738 738 ntBASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 DUBR-205ENST00000495228 411 ntTSL 2 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 RNU6-941P-201ENST00000516346 108 ntBASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 MIR4675-201ENST00000577898 77 ntBASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 AL162431.4-201ENST00000604674 411 ntBASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.18□□□□□ -0.94
RIMBP3Q9UFD9 ASNSP1-204ENST00000641977 1664 ntBASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 AC119751.6-201ENST00000416712 186 ntBASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 AC044797.1-201ENST00000445744 679 ntBASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 AC021678.3-201ENST00000517893 476 ntBASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 AC005224.3-201ENST00000584683 2140 ntBASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
RIMBP3Q9UFD9 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 NENFP1-201ENST00000419476 466 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 FAM96AP1-201ENST00000430879 482 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 MORF4L1P5-201ENST00000433352 961 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 RPL23AP60-201ENST00000450011 454 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AC073594.1-201ENST00000462065 364 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 RNA5SP400-201ENST00000517155 111 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AC009117.1-201ENST00000563948 554 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AC091905.4-201ENST00000623432 202 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AP001541.1-201ENST00000623322 1904 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AC079741.1-201ENST00000321498 212 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 CAV1-204ENST00000393470 598 ntTSL 4 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AC004980.4-201ENST00000513375 203 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AL359704.2-201ENST00000604335 521 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 CYP4F35P-202ENST00000636121 390 ntBASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms