Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 RNU1-134P-201ENST00000362935 165 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 SNORD8-201ENST00000363915 110 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AL512422.1-201ENST00000407033 553 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 NME1P1-201ENST00000420914 382 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 CR383658.1-201ENST00000514609 734 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AC007956.1-201ENST00000555623 542 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 OR7A8P-201ENST00000595427 913 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AC015849.6-201ENST00000605454 474 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AL591167.1-201ENST00000607321 456 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AC103703.1-201ENST00000634783 663 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AC007159.1-201ENST00000566529 4706 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 AC008627.1-201ENST00000517511 1704 ntBASIC6.96□□□□□ -1.3
HDAC6Q9UBN7 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AC119674.1-213ENST00000641177 1386 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AC005725.1-201ENST00000577346 2607 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 RNA5SP273-201ENST00000362484 113 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 RNU1-49P-201ENST00000363468 159 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AL050335.1-201ENST00000396909 869 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 SNORA81-201ENST00000408493 178 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 RPL23AP19-201ENST00000436229 369 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 PPIAP10-201ENST00000438675 458 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 MGAT2P1-201ENST00000449718 797 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 PSMA2P2-201ENST00000504319 686 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 RNA5SP271-201ENST00000516700 88 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AC022826.1-201ENST00000519383 805 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 OR5D2P-201ENST00000524390 911 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AP001858.2-201ENST00000536213 601 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AP000894.4-201ENST00000610185 483 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AP005212.4-201ENST00000614206 710 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AC024255.1-201ENST00000614376 102 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AC022960.2-201ENST00000616300 666 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 MIR7159-201ENST00000620587 66 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AL132640.3-201ENST00000630473 177 ntBASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC6Q9UBN7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 RN7SKP81-201ENST00000365603 331 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AL360271.1-201ENST00000395679 510 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 CASKP1-201ENST00000412870 582 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC117434.1-201ENST00000419971 836 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC244033.1-201ENST00000426826 870 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms