Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 RPL35AP31-201ENST00000418340 337 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AL645936.1-201ENST00000441979 518 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AL445991.1-201ENST00000450381 475 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC104164.1-201ENST00000460282 590 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 RN7SL502P-201ENST00000481857 290 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC012123.2-201ENST00000485809 248 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 RNA5SP96-201ENST00000516041 107 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AP005136.2-201ENST00000583253 1049 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC090774.2-201ENST00000584708 322 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AL591222.2-201ENST00000604443 754 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 RPSAP75-201ENST00000605848 301 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AL133481.2-203ENST00000607558 139 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 U91328.4-201ENST00000608919 517 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC211486.4-201ENST00000621495 113 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 AL355488.2-201ENST00000609909 2850 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 PRELID1P1-201ENST00000403549 660 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 RPS7P8-201ENST00000418311 581 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC097359.1-201ENST00000447946 463 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC009963.4-201ENST00000448535 339 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 PFN1P6-201ENST00000476786 399 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC117500.1-201ENST00000497352 755 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC114774.1-201ENST00000507410 1770 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC026782.2-201ENST00000510845 636 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 SNORA74.1-201ENST00000516320 180 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AL158152.1-201ENST00000602652 1435 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 SMIM12P1-201ENST00000603004 274 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AL049840.6-201ENST00000604583 345 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AL645933.2-201ENST00000606743 1207 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC089999.3-201ENST00000622440 577 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AL357562.1-201ENST00000624911 609 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAPAQ9P0L0 AC232271.1-201ENST00000602455 2715 ntBASIC5.61□□□□□ -1.51
VAPAQ9P0L0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.6□□□□□ -1.51
VAPAQ9P0L0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms