Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 Y_RNA.62-201ENST00000362840 99 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 SNORA17A-201ENST00000391185 133 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 TRIM60P5Y-201ENST00000413946 574 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AL929472.1-201ENST00000417484 429 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 RPL21P50-201ENST00000417698 477 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC066692.1-201ENST00000421721 457 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 RPP40P1-201ENST00000426762 456 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 RBMY3AP-201ENST00000449381 1145 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 RPL23AP64-201ENST00000469465 435 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 RN7SL177P-201ENST00000476596 299 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC027308.1-201ENST00000517993 110 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC010376.1-201ENST00000522101 334 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AL133399.1-201ENST00000527476 298 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC027369.2-201ENST00000528030 440 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AL049840.5-201ENST00000602827 552 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC008536.1-201ENST00000602872 669 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC008759.3-201ENST00000613300 508 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AL590410.1-201ENST00000617925 333 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 SNORA17.5-201ENST00000630429 132 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AL359922.2-201ENST00000581788 3017 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 CASC19-246ENST00000641625 1606 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 MAPK10-371ENST00000641952 5209 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 TTC3P1-201ENST00000399586 6081 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 MTCO1P25-201ENST00000414449 1799 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 CDY5P-201ENST00000411487 1580 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 CDY9P-201ENST00000451397 1580 ntBASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.33□□□□□ -1.24
PDLIM7Q9NR12 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 EPS15P1-202ENST00000459691 2071 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC105114.1-201ENST00000624795 1862 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AL353763.1-201ENST00000624467 1628 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AMZ2P2-201ENST00000406819 1057 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC017035.1-201ENST00000411999 1115 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 CDY17P-201ENST00000414121 1282 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AL158827.1-201ENST00000416300 391 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC079355.1-201ENST00000421770 223 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 OR9N1P-201ENST00000491296 333 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 LSM3P4-201ENST00000502948 309 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC008945.1-201ENST00000505144 499 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 Y_RNA.688-201ENST00000516565 95 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 RN7SKP35-201ENST00000517210 151 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AP003033.1-201ENST00000527244 415 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC004241.3-201ENST00000611728 517 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AC024884.1-201ENST00000620583 399 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms