Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AC007159.1-201ENST00000566529 4706 ntBASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 BRWD1P3-201ENST00000428816 390 ntBASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 OR3D1P-201ENST00000438288 955 ntBASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AL162739.1-201ENST00000450606 307 ntBASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AC093719.1-201ENST00000480427 441 ntBASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AP001823.1-201ENST00000604056 1003 ntBASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 AL161756.3-201ENST00000641216 2071 ntBASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
UPF3BQ9BZI7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 RN7SKP275-201ENST00000364626 301 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 RN7SKP229-201ENST00000410465 302 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 RN7SKP144-201ENST00000411108 279 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 AL096829.1-201ENST00000413677 457 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 RPS15AP30-201ENST00000420976 390 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 USP24P1-201ENST00000433802 779 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 GAPDHP59-201ENST00000435908 267 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 ZNF619P1-201ENST00000446539 752 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 RPL23AP60-201ENST00000450011 454 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 RN7SL552P-201ENST00000462094 276 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 RPL12P30-201ENST00000488389 499 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 AC090958.1-201ENST00000511122 351 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 HMGN1P17-201ENST00000513734 295 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 RNA5SP441-201ENST00000516809 88 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 OFD1P17-201ENST00000437639 3018 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 SNX18P3-202ENST00000565670 1750 ntBASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
UPF3BQ9BZI7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 RNA5SP198-201ENST00000410376 127 ntBASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 CLUHP1-201ENST00000435012 1190 ntBASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 RPS3AP38-201ENST00000435889 763 ntBASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AC004232.2-201ENST00000574245 821 ntBASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AL352984.2-201ENST00000611153 546 ntBASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 AC109309.2-201ENST00000612597 332 ntBASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 RFPL4AP6-201ENST00000616792 846 ntBASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
UPF3BQ9BZI7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 533.8 ms