Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.54□□□□□ -1.2
SHANK3Q9BYB0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC7.54□□□□□ -1.2
SHANK3Q9BYB0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK3Q9BYB0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.54□□□□□ -1.2
SHANK3Q9BYB0 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK3Q9BYB0 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK3Q9BYB0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
SHANK3Q9BYB0 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK3Q9BYB0 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SHANK3Q9BYB0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC087672.1-201ENST00000479876 766 ntBASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC024451.1-201ENST00000508013 779 ntBASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 FKBP1AP1-201ENST00000594588 318 ntBASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC011497.2-201ENST00000600255 639 ntBASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC012616.1-201ENST00000600294 197 ntBASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC009704.2-201ENST00000618739 483 ntBASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AL445528.2-201ENST00000620582 470 ntBASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AC092070.2-203ENST00000598377 3644 ntBASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 AL034549.2-201ENST00000618285 3373 ntBASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.53□□□□□ -1.2
SHANK3Q9BYB0 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 AC019205.1-201ENST00000421830 730 ntBASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 CDC42P3-201ENST00000518493 633 ntBASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 AC004825.1-201ENST00000555068 586 ntBASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 AC106730.2-201ENST00000566641 540 ntBASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 MIR132-201ENST00000591554 101 ntBASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 CASC19-264ENST00000641912 1184 ntBASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SHANK3Q9BYB0 AC018765.1-201ENST00000623357 3446 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AL353763.1-201ENST00000624467 1628 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AC105342.1-201ENST00000378334 6848 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AL391262.1-201ENST00000556558 1992 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AC137056.2-201ENST00000624055 1958 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AC130304.1-201ENST00000622942 2385 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AC108075.1-201ENST00000424692 529 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 OR6D1P-201ENST00000436165 939 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AC005297.1-201ENST00000444765 862 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AC126177.5-201ENST00000549599 178 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AC009962.1-201ENST00000567327 3813 ntBASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK3Q9BYB0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.51□□□□□ -1.21
SHANK3Q9BYB0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.51□□□□□ -1.21
SHANK3Q9BYB0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK3Q9BYB0 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK3Q9BYB0 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SHANK3Q9BYB0 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SHANK3Q9BYB0 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SHANK3Q9BYB0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.51□□□□□ -1.21
SHANK3Q9BYB0 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms