Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 OR4A41P-201ENST00000533053 928 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC090424.1-201ENST00000535243 736 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AP005119.1-201ENST00000580956 292 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC006115.2-201ENST00000596823 202 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC025857.2-201ENST00000602711 238 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 MIR6778-201ENST00000617912 73 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AL157762.1-201ENST00000619612 415 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC111152.1-202ENST00000635848 339 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 THAP12P9-201ENST00000503971 2360 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 RNU1-134P-201ENST00000362935 165 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 RNA5SP279-201ENST00000365513 117 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 RN7SKP269-201ENST00000365545 319 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AL132875.1-201ENST00000403623 949 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC092865.3-201ENST00000425390 1026 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 RPSAP32-201ENST00000432681 526 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 RPS7P3-201ENST00000443360 580 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 RPL5P10-201ENST00000445207 894 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 RSU1P1-201ENST00000453416 441 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 RN7SKP35-201ENST00000517210 151 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC110056.1-201ENST00000525759 911 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC090826.1-203ENST00000569235 490 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AL078601.3-201ENST00000573303 535 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC073333.2-201ENST00000603589 769 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 MIR6806-201ENST00000622141 64 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC073593.1-201ENST00000624500 411 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AC000095.2-202ENST00000637415 154 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 AP001157.1-201ENST00000550837 2339 ntBASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RSPO3Q9BXY4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RSPO3Q9BXY4 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.46□□□□□ -1.53
RSPO3Q9BXY4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.46□□□□□ -1.53
RSPO3Q9BXY4 AC093297.3-201ENST00000607056 2517 ntBASIC5.46□□□□□ -1.53
RSPO3Q9BXY4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
RSPO3Q9BXY4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RSPO3Q9BXY4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RSPO3Q9BXY4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RSPO3Q9BXY4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 RN7SKP15-201ENST00000364742 309 ntBASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 SSR1P1-201ENST00000407630 814 ntBASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.46□□□□□ -1.54
RSPO3Q9BXY4 KIF4CP-201ENST00000422742 1279 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms