Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC080014.1-201ENST00000496877 1201 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC105420.1-201ENST00000504389 582 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 MTND1P5-201ENST00000517906 940 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RPL12P22-201ENST00000519073 490 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC107952.1-201ENST00000524200 376 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 MIR3135A-201ENST00000578460 77 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC107993.1-201ENST00000591343 684 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC009955.2-201ENST00000597288 542 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 BMS1P7-201ENST00000602440 1052 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC103591.3-201ENST00000608684 209 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 MIR8089-201ENST00000620165 82 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL157770.1-201ENST00000623049 439 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 OR1S1-201ENST00000624470 978 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SPATA31C1-201ENST00000420021 3895 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 NXF4-202ENST00000416098 1465 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC073342.2-201ENST00000595842 1800 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AL137058.3-201ENST00000624531 3099 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 RNA5SP355-201ENST00000365317 135 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 RNA5SP53-201ENST00000391299 120 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 RN7SKP254-201ENST00000410685 310 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 UBTFL2-201ENST00000411859 1191 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 LINC01881-201ENST00000416103 412 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 PPIAP23-201ENST00000420099 497 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 TNPO1P1-201ENST00000423641 1138 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC245047.1-201ENST00000433276 873 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AL592114.2-201ENST00000440142 532 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 PRDX1P1-201ENST00000449329 596 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 OR52I1-201ENST00000450052 1050 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 RPL12P26-201ENST00000452430 487 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AP000805.1-201ENST00000471604 784 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 RN7SL518P-201ENST00000491887 280 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 MTCO2P32-201ENST00000514865 403 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 RNU6-232P-201ENST00000517144 64 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms