Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 POU5F1P5-201ENST00000445059 658 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC016687.1-201ENST00000482574 353 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 MTND3P24-201ENST00000506306 329 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 NACAP5-201ENST00000509863 636 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 CR383656.14-201ENST00000551951 406 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC023310.2-201ENST00000553844 547 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 OR4H6P-202ENST00000603819 340 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 NDUFB9P1-201ENST00000604683 510 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC011891.2-201ENST00000604949 397 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC006249.1-201ENST00000621223 471 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC140479.2-201ENST00000421567 3130 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 CUL4AP1-201ENST00000514750 1863 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 CASC19-246ENST00000641625 1606 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 RNA5SP77-201ENST00000365394 120 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 MIR191-201ENST00000384873 92 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 RNU11-6P-201ENST00000391127 133 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 RNA5SP115-201ENST00000411160 107 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AL357078.2-201ENST00000416486 427 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC074367.1-201ENST00000438685 1125 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 MTND6P5-201ENST00000448266 512 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AL353718.1-201ENST00000451028 517 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 RANP2-201ENST00000456833 229 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 RN7SL612P-201ENST00000497704 295 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AP003049.1-201ENST00000529418 457 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 HMGN2P47-201ENST00000559378 272 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC026367.3-201ENST00000619032 590 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AL590396.2-201ENST00000636511 1041 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC119674.1-220ENST00000641502 1048 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC012078.1-201ENST00000405035 1646 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AC020656.2-201ENST00000613291 5309 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 AL512283.1-201ENST00000606756 1384 ntBASIC7.07□□□□□ -1.28
CDK5RAP3Q96JB5 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AC092724.1-201ENST00000624623 3397 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 CR382285.2-201ENST00000624662 1495 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms