Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 OR9K2-201ENST00000305377 1122 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 Y_RNA.311-201ENST00000365068 96 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 SNORA4.3-201ENST00000365564 137 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 FANK1-201ENST00000368689 522 ntTSL 3 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 Y_RNA.409-201ENST00000383990 98 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 RNU6-1105P-201ENST00000384774 107 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 Z82198.3-201ENST00000421145 199 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC003071.2-201ENST00000423857 315 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 RN7SL456P-201ENST00000469290 295 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC116353.1-201ENST00000489727 316 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 RN7SL864P-201ENST00000493457 285 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC113208.1-201ENST00000497944 318 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 snoU109.5-201ENST00000516231 132 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC093249.1-201ENST00000567049 203 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC019322.1-201ENST00000571869 389 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC100830.2-201ENST00000581636 240 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 WDR45BP1-201ENST00000583470 1029 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AP000238.1-201ENST00000608759 426 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AL133215.3-201ENST00000609801 448 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC103710.1-201ENST00000610003 901 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AC138393.1-206ENST00000540997 1886 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 AL353583.1-201ENST00000624195 1855 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 AOX2P-204ENST00000487742 3284 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LRCH3Q96II8 AC073324.1-201ENST00000425993 1435 ntBASIC8.71□□□□□ -1.01
LRCH3Q96II8 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
LRCH3Q96II8 AC020549.1-201ENST00000536916 1440 ntBASIC8.71□□□□□ -1.01
LRCH3Q96II8 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
LRCH3Q96II8 AL353132.1-201ENST00000415260 2043 ntBASIC8.71□□□□□ -1.01
LRCH3Q96II8 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
LRCH3Q96II8 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
LRCH3Q96II8 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LRCH3Q96II8 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LRCH3Q96II8 AC010680.2-201ENST00000603521 2117 ntBASIC8.71□□□□□ -1.01
LRCH3Q96II8 MAPK10-313ENST00000641405 2469 ntBASIC8.71□□□□□ -1.01
LRCH3Q96II8 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LRCH3Q96II8 CYP2G1P-201ENST00000252909 2511 ntTSL 2 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 Y_RNA.166-201ENST00000363730 102 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 RNU6-621P-201ENST00000364752 109 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 RNU1-16P-201ENST00000365477 164 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 MIR559-201ENST00000385188 96 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 AC092642.1-201ENST00000392417 425 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 RPS24P12-201ENST00000402084 394 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 KRT18P52-201ENST00000404956 846 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 AL353193.1-201ENST00000421444 268 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 HMGN1P32-201ENST00000441744 256 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 RPL3P10-201ENST00000476002 1164 ntBASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms