Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC096632.2-201ENST00000438139 1239 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 AL020997.1-201ENST00000446554 349 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 RPL19P11-201ENST00000495944 589 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC092349.1-201ENST00000504903 310 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC131392.1-201ENST00000506490 633 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC083906.1-201ENST00000509298 406 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 UGT2A3P7-201ENST00000510485 734 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 SNORA70.11-201ENST00000515987 138 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 SNORA70.13-201ENST00000516116 138 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VMP1Q96GC9 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 AL360012.1-201ENST00000602813 131 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 AL589743.6-201ENST00000611025 117 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC005393.1-201ENST00000617916 584 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC114546.4-201ENST00000624413 369 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 WDR95P-201ENST00000425638 1542 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AC119674.1-213ENST00000641177 1386 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 RPS17P17-201ENST00000419392 409 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 HMGB3P10-201ENST00000434734 572 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AC234771.2-201ENST00000445718 597 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 AC105918.1-201ENST00000474399 838 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 AC114728.1-201ENST00000488289 483 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 OR9N1P-201ENST00000491296 333 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AC124891.1-201ENST00000536322 519 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 TDGP1-201ENST00000543961 1229 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AC138207.8-204ENST00000579588 527 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 AC004805.3-201ENST00000603178 310 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 BUB1P1-201ENST00000603541 607 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 AC073488.9-201ENST00000631601 754 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VMP1Q96GC9 RLIMP2-201ENST00000427891 1563 ntBASIC6.1□□□□□ -1.43
VMP1Q96GC9 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
VMP1Q96GC9 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.09□□□□□ -1.43
VMP1Q96GC9 AL353743.3-201ENST00000442109 1468 ntBASIC6.09□□□□□ -1.43
VMP1Q96GC9 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.09□□□□□ -1.43
VMP1Q96GC9 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VMP1Q96GC9 AC093775.1-201ENST00000624154 1868 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms