Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC009220.2-201ENST00000489759 1751 ntBASIC8.22□□□□□ -1.09
NEDD1Q8NHV4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
NEDD1Q8NHV4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NEDD1Q8NHV4 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NEDD1Q8NHV4 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NEDD1Q8NHV4 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NEDD1Q8NHV4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 RNU5B-4P-201ENST00000363508 111 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 RNU6-670P-201ENST00000364312 104 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC234772.1-201ENST00000377927 937 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 RNU6-40P-201ENST00000384254 107 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 RN7SKP91-201ENST00000410852 288 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL513175.2-201ENST00000422071 443 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL049610.1-201ENST00000423374 372 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 GSTA6P-201ENST00000424144 582 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL513321.1-201ENST00000441175 761 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 MTND5P20-201ENST00000448677 143 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 RPL7AP71-201ENST00000451120 739 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 ZNF114P1-201ENST00000453500 292 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL096803.1-201ENST00000456921 1021 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 RN7SL372P-201ENST00000461982 298 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 UOX-201ENST00000471089 899 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 SYPL1P1-201ENST00000473622 768 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 RN7SL267P-201ENST00000485107 261 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC024451.1-201ENST00000508013 779 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC092593.2-201ENST00000513866 913 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 Y_RNA.702-201ENST00000516843 96 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 OR5AL2P-201ENST00000532185 920 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC084757.1-201ENST00000559987 490 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC022069.1-201ENST00000582910 658 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 IGLJCOR18-201ENST00000584002 424 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 DPRXP5-201ENST00000604662 539 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC010678.1-201ENST00000614118 713 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC005899.6-201ENST00000620729 297 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC093875.1-201ENST00000623688 504 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC011471.4-201ENST00000638271 216 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC099654.15-201ENST00000639802 509 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 ATP5BP1-201ENST00000411980 1574 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 OR4C1P-202ENST00000641065 1569 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 CR383656.5-201ENST00000547616 1340 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 AC129502.1-201ENST00000623261 1654 ntBASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.21□□□□□ -1.1
NEDD1Q8NHV4 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 RN7SKP118-201ENST00000364331 330 ntBASIC8.2□□□□□ -1.1
NEDD1Q8NHV4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms