Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AL451064.2-201ENST00000623514 1654 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC132219.2-201ENST00000624416 2327 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 FO082842.1-201ENST00000423552 1370 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 RN7SKP191-201ENST00000364713 306 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AP002784.2-201ENST00000397300 549 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AL022324.2-201ENST00000434827 780 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 MTND1P34-201ENST00000438556 671 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AL627224.1-201ENST00000448334 444 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 UOX-201ENST00000471089 899 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 RPL5P33-201ENST00000487833 905 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC026826.1-201ENST00000493002 361 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC112225.1-201ENST00000508230 297 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 SNX18P23-201ENST00000510867 677 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC133963.2-201ENST00000513686 578 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC010442.1-201ENST00000515583 816 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC027369.2-201ENST00000528030 440 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC124891.1-201ENST00000536322 519 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 OR5BK1P-201ENST00000550421 823 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 ULK4P1-202ENST00000565174 503 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC087575.1-201ENST00000585087 229 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC020914.7-201ENST00000594477 545 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 RPS4XP21-201ENST00000603814 750 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC004908.1-201ENST00000606572 541 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC245100.7-201ENST00000609678 442 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 OR7A1P-202ENST00000641542 1158 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AC022507.1-201ENST00000548349 1505 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 CCAT2-201ENST00000630920 1752 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 AL512329.1-201ENST00000404600 1592 ntBASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM48Q8IWZ4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM48Q8IWZ4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM48Q8IWZ4 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
TRIM48Q8IWZ4 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM48Q8IWZ4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms