Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC135068.11-201ENST00000636378 921 ntBASIC8.14□□□□□ -1.11
RNF135Q8IUD6 MTND1P37-201ENST00000636562 264 ntBASIC8.14□□□□□ -1.11
RNF135Q8IUD6 NF1P2-201ENST00000556855 2505 ntBASIC8.14□□□□□ -1.11
RNF135Q8IUD6 MAPK10-319ENST00000641459 2542 ntBASIC8.14□□□□□ -1.11
RNF135Q8IUD6 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 MRRFP1-201ENST00000435941 1675 ntBASIC8.14□□□□□ -1.11
RNF135Q8IUD6 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 MFSD8-256ENST00000641949 1640 ntBASIC8.14□□□□□ -1.11
RNF135Q8IUD6 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.14□□□□□ -1.11
RNF135Q8IUD6 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC125232.1-201ENST00000452554 1408 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 MIR551B-201ENST00000384984 96 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 HMGB3P18-201ENST00000406327 590 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 TPT1P2-201ENST00000413105 503 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 RBMY2GP-201ENST00000418671 1034 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC006065.1-201ENST00000422539 802 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 RBMY2NP-201ENST00000434454 1028 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 LINC00328-2P-201ENST00000436585 219 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 YWHAZP2-201ENST00000440317 728 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 MTCO2P25-201ENST00000447065 681 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 TPT1P14-201ENST00000448018 505 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC079776.3-201ENST00000450665 370 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC003071.1-201ENST00000451219 789 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 DDX39BP2-208ENST00000453923 258 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 RPL12P7-201ENST00000493832 494 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 OR51A1P-201ENST00000511110 946 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC114781.4-201ENST00000513707 639 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 IGHVIV-44-1-201ENST00000519334 338 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 YWHABP2-201ENST00000540201 713 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC092747.2-201ENST00000545069 983 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC004825.1-201ENST00000555068 586 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 ZNF519P2-201ENST00000557032 169 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 PPIAP14-201ENST00000577627 496 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 PRR13P4-201ENST00000577786 421 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 NDUFB9P1-201ENST00000604683 510 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AL158211.4-201ENST00000606988 584 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC012360.2-201ENST00000609349 391 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC090517.2-201ENST00000614966 680 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC138932.5-201ENST00000617759 563 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AL356321.1-201ENST00000621360 228 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AC011815.3-201ENST00000624194 473 ntBASIC8.13□□□□□ -1.11
RNF135Q8IUD6 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF135Q8IUD6 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms