Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 OR4A41P-201ENST00000533053 928 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC121758.1-202ENST00000556917 658 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC011270.1-201ENST00000558606 583 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC024589.2-201ENST00000605642 1294 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 MTCO1P1-201ENST00000624263 1081 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 AC125336.1-201ENST00000508893 2827 ntBASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP54Q7Z3B4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC079753.1-201ENST00000623243 3868 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 HMGA1P8-201ENST00000414130 321 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 DHFRP2-201ENST00000414224 547 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AL359885.1-201ENST00000415786 903 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 OSTCP4-201ENST00000424397 449 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 HMGB1P32-201ENST00000425971 565 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 MTCO1P51-201ENST00000427672 1060 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC097359.1-201ENST00000447946 463 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 YRDCP3-201ENST00000456507 480 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 MTND6P32-201ENST00000457611 483 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC005165.2-201ENST00000466070 380 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC107015.1-201ENST00000466902 747 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 RPL12P31-201ENST00000478433 450 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 RN7SL714P-201ENST00000487050 298 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 RN7SL568P-201ENST00000493069 298 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 HMGN1P16-201ENST00000508308 283 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 GUSBP9-201ENST00000510138 584 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AP000859.1-201ENST00000525536 307 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AP000919.1-201ENST00000582850 985 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC005332.4-201ENST00000592752 579 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC073389.3-201ENST00000609434 935 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC232271.1-201ENST00000602455 2715 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 CASC19-246ENST00000641625 1606 ntBASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP54Q7Z3B4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC011504.1-201ENST00000623331 4103 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms