Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AP002453.1-201ENST00000492327 668 ntBASIC4.1□□□□□ -1.75
SCXQ7RTU7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 HNRNPCP1-201ENST00000556181 766 ntBASIC4.1□□□□□ -1.75
SCXQ7RTU7 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 BUB1P1-201ENST00000603541 607 ntBASIC4.1□□□□□ -1.75
SCXQ7RTU7 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 U1.34-201ENST00000618578 162 ntBASIC4.1□□□□□ -1.75
SCXQ7RTU7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 AC022400.9-201ENST00000623633 273 ntBASIC4.1□□□□□ -1.75
SCXQ7RTU7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCXQ7RTU7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCXQ7RTU7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCXQ7RTU7 EEF1A1P12-201ENST00000443590 1346 ntBASIC4.1□□□□□ -1.75
SCXQ7RTU7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCXQ7RTU7 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.1□□□□□ -1.75
SCXQ7RTU7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCXQ7RTU7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCXQ7RTU7 AL031595.2-201ENST00000624215 19071 ntBASIC4.1□□□□□ -1.75
SCXQ7RTU7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCXQ7RTU7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCXQ7RTU7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCXQ7RTU7 AL161912.4-201ENST00000623889 2468 ntBASIC4.1□□□□□ -1.75
SCXQ7RTU7 AC027279.1-201ENST00000568885 4284 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL359976.1-201ENST00000418655 3528 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 RN7SKP15-201ENST00000364742 309 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 RNA5SP122-201ENST00000384457 108 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL451046.1-201ENST00000406097 534 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 SNORA77.2-201ENST00000408571 112 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC096537.2-201ENST00000413707 714 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL035422.1-201ENST00000414193 397 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL389925.1-201ENST00000432257 728 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL645936.1-201ENST00000441979 518 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 RPL5P7-201ENST00000444235 813 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC022415.1-202ENST00000486612 523 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 RN7SL561P-201ENST00000488553 281 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 SNX18P24-201ENST00000505249 671 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC093815.1-201ENST00000508637 280 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 IGKV2-4-201ENST00000523070 340 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL078623.1-201ENST00000602702 907 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC124916.2-201ENST00000604416 224 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL451049.1-201ENST00000608672 497 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 TCL6_3.1-201ENST00000619064 137 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 MRPL57P1-201ENST00000621486 265 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC119674.1-213ENST00000641177 1386 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCXQ7RTU7 QRSL1P1-201ENST00000400977 1540 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.09□□□□□ -1.75
SCXQ7RTU7 AC011369.2-201ENST00000624423 1567 ntBASIC4.09□□□□□ -1.75
SCXQ7RTU7 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
SCXQ7RTU7 AC016745.2-201ENST00000608834 3443 ntBASIC4.09□□□□□ -1.76
SCXQ7RTU7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms