Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.33□□□□□ -1.56
VBP1P61758 MIR4800-201ENST00000537353 80 ntBASIC5.33□□□□□ -1.56
VBP1P61758 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.33□□□□□ -1.56
VBP1P61758 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.33□□□□□ -1.56
VBP1P61758 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.33□□□□□ -1.56
VBP1P61758 AC092718.4-201ENST00000566639 716 ntBASIC5.33□□□□□ -1.56
VBP1P61758 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.33□□□□□ -1.56
VBP1P61758 MIR4660-201ENST00000583549 74 ntBASIC5.33□□□□□ -1.56
VBP1P61758 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.33□□□□□ -1.56
VBP1P61758 AC004805.3-201ENST00000603178 310 ntBASIC5.33□□□□□ -1.56
VBP1P61758 AC141002.1-201ENST00000607025 279 ntBASIC5.33□□□□□ -1.56
VBP1P61758 AC012510.1-201ENST00000607946 759 ntBASIC5.33□□□□□ -1.56
VBP1P61758 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VBP1P61758 uc_338.26-201ENST00000612659 160 ntBASIC5.33□□□□□ -1.56
VBP1P61758 pRNA.9-201ENST00000618609 89 ntBASIC5.33□□□□□ -1.56
VBP1P61758 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.33□□□□□ -1.56
VBP1P61758 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VBP1P61758 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VBP1P61758 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
VBP1P61758 AC104260.2-201ENST00000623551 3497 ntBASIC5.33□□□□□ -1.56
VBP1P61758 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VBP1P61758 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
VBP1P61758 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.32□□□□□ -1.56
VBP1P61758 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.32□□□□□ -1.56
VBP1P61758 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VBP1P61758 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
VBP1P61758 AC126474.2-201ENST00000623268 1750 ntBASIC5.32□□□□□ -1.56
VBP1P61758 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VBP1P61758 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.32□□□□□ -1.56
VBP1P61758 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 RNU4-44P-201ENST00000363050 141 ntBASIC5.32□□□□□ -1.56
VBP1P61758 RNA5SP152-201ENST00000365184 110 ntBASIC5.32□□□□□ -1.56
VBP1P61758 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 VDAC2P1-201ENST00000399358 958 ntBASIC5.32□□□□□ -1.56
VBP1P61758 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 AL358178.1-201ENST00000407698 397 ntBASIC5.32□□□□□ -1.56
VBP1P61758 SNORA79B-201ENST00000410557 148 ntBASIC5.32□□□□□ -1.56
VBP1P61758 RN7SKP279-201ENST00000411383 298 ntBASIC5.32□□□□□ -1.56
VBP1P61758 GPS2P1-201ENST00000411761 986 ntBASIC5.32□□□□□ -1.56
VBP1P61758 SNX18P13-201ENST00000412442 529 ntBASIC5.32□□□□□ -1.56
VBP1P61758 MYL6P5-201ENST00000412707 459 ntBASIC5.32□□□□□ -1.56
VBP1P61758 RPLP1P10-201ENST00000413972 339 ntBASIC5.32□□□□□ -1.56
VBP1P61758 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC5.32□□□□□ -1.56
VBP1P61758 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.32□□□□□ -1.56
VBP1P61758 AC096632.2-201ENST00000438139 1239 ntBASIC5.32□□□□□ -1.56
VBP1P61758 SNX18P9-201ENST00000440580 835 ntBASIC5.32□□□□□ -1.56
VBP1P61758 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC5.32□□□□□ -1.56
VBP1P61758 RN7SL239P-201ENST00000490061 300 ntBASIC5.32□□□□□ -1.56
VBP1P61758 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.32□□□□□ -1.56
VBP1P61758 ENPP7P3-201ENST00000509123 241 ntBASIC5.32□□□□□ -1.56
VBP1P61758 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.32□□□□□ -1.56
VBP1P61758 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.32□□□□□ -1.56
VBP1P61758 AL358913.1-201ENST00000554342 121 ntBASIC5.32□□□□□ -1.56
VBP1P61758 BMS1P16-201ENST00000556075 1147 ntBASIC5.32□□□□□ -1.56
VBP1P61758 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
VBP1P61758 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VBP1P61758 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.32□□□□□ -1.56
VBP1P61758 RPL17P3-201ENST00000605695 525 ntBASIC5.32□□□□□ -1.56
VBP1P61758 AC027559.1-201ENST00000636288 271 ntBASIC5.32□□□□□ -1.56
VBP1P61758 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VBP1P61758 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VBP1P61758 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
VBP1P61758 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 AC005702.3-201ENST00000585345 1447 ntBASIC5.31□□□□□ -1.56
VBP1P61758 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.31□□□□□ -1.56
VBP1P61758 AC027228.2-201ENST00000567141 2154 ntBASIC5.31□□□□□ -1.56
VBP1P61758 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VBP1P61758 MIR345-201ENST00000362114 98 ntBASIC5.31□□□□□ -1.56
VBP1P61758 MIR614-201ENST00000385082 90 ntBASIC5.31□□□□□ -1.56
VBP1P61758 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VBP1P61758 PCNAP3-201ENST00000397222 778 ntBASIC5.31□□□□□ -1.56
VBP1P61758 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.31□□□□□ -1.56
VBP1P61758 AP003385.1-201ENST00000426387 893 ntBASIC5.31□□□□□ -1.56
VBP1P61758 RPS7P14-201ENST00000426405 583 ntBASIC5.31□□□□□ -1.56
VBP1P61758 AC083862.1-201ENST00000427378 1242 ntBASIC5.31□□□□□ -1.56
VBP1P61758 AL136231.1-201ENST00000429407 730 ntBASIC5.31□□□□□ -1.56
VBP1P61758 PRPS1P2-201ENST00000430496 937 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms